CI01000026_02476591_02498283


Basic Information

Item Value
gene id CI01000026_02476591_02498283
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2476591 ~ 2498501 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_02476591_02498283.mRNA
TGAACCTAACACCAACCATAATCCAGACATGGGACATCTGGAGTTAATACTAGTATTAATATGGATAACAGGTTGCTTTACTATAGACAAGAACAAGAATAGATATGCCGTGACAGAGAGGGATGCTGTGTTAACCTCCTGTGACTTCAATAAAAATGAAGAACCTTTCTGCAACTTCCAACAAGACATCACAGATAATGGTGATTGGACACGCCATACTGGACCCACCCCAACCACAGGCACAGGACCTAATGGAGACTATCCAGATGGCTCTGGCTATTACATATATCATGAGGCTGACAACAGTGTAAATGGACAGAAAGTACGCCTCCTCAGCCCAGTTATTAGTAATGGACCTGCGGAGATCTGTGTACAGTTCTACTACTACATGTATGGCAGTGACAGCAGTAACACTCTGACTGTATTGGCCAAACATTCCAGCTCTGAGGAACAACTGTGGCAAAAAATTGGGATACAGAGCCCATCATGGCTTGGAGCTTCTGTCACAGTGCCAATACCAGCTGGGCAGACTCAGGTGGGTCTGCTTAAAAACAGCGAAAGAGTGCTAATTCACGTGTTCATATTGTGTTTCAAGCAATGCGTGGGCTCTCTTCATCATGTGACACTGCCCTGGATAACATTGTCATCAGCGAGGGAGCCTGTGCTGGTACTTTACTCTACCCTTATCGCAGGCTGTATAGCTGGGTGTGATTTTGATGAAGCTGACTATTGTGGCTGGATGAATGAGGTATCACATGACAATATCTTTGGTTGGGAGCCTTGGACTGGACAGACAGATACACCAGGCACTGGCCCTGATGATGACTTCTCTAAACCAGGATTGGGGTCATACCTGTTAATGGACTCCAGCTATAGCATTGAAGGAGAATCTGCTCAGCTCTGGAGTCCCTCTACCTCAGCCTCTGGTTGCCTGCAGCTGGACTTTCATTACTACATGTATGGCAGTGCTGCCAACATGGAACTTAATGTCCATGCAGTCACCACTGGTGGGGTACTTGGAGCCCCTATTTTCAGTCTCAAAGGGAATCAAGGTCAGGCATGGAAGCCCGCAAGTGTTCGCTACATCGGCTCAGCTGGTACAGTGCAGTTTGTAATTGTTGGTGTTTATGGTGAAACAGACCTAACTGATATTGCAATTGATAGTGTCTGCATTACCACTTGTACAGCTCTGAAATGCCCAGCCAACAGCCACTTTGAATCATGCGCCCCAATTTGCCAACCTTCCTGTAACCCAGTTCCACCAAACCTGTGCACTGGTCCTTGTTCTGAAGGATGTGTTTGTGACCCTGGATACATCCTCAGTGCTGGCCAGTGTGTGAAAGAAGATGCATGTGGCTGCAGCTATAATGGACATTATTATCAGCCAGGTGAAGAGTTCTACACCAAGGACTGTGAGCTACTGTGTAAGTGTAACCCCCCATTTGTTACCTGTAATGCCGCTGACTGTCCACCAATGGAACAATGTGGAGTACAGGATGGTGTAATTGGGTGTTACCCAGAAGGATCTCAAGACTGTATTATCTCTGGTGACCCTCATTATAACACCTTTGATGGCAAATACTACAGCTTCATGGGCACTTGCACCTACACTCTGGCCCGCACCTGTAAAAACAACACCGGCCCCTGGTTCTCCATAGAGGGTAAGAATGAAGAGAGAGGAGTTTCTGGTGTTTCTTACCTGAGGAAACTGTACGTGACTGTTGATGGTGTCACTGTGACAATGATGAAAAACAAGAGAACTCTGGTAAATGGACTCAGGGTGTCCCTCCCCCACTTCCCATCTCCACTCATTTCTCTGTCTCTTGCTGGCCAATATGTAATCCTCACGACTCCGTTCGGCCTGAAGGTGCAGTGGGACGGCAACCATTACGCCAAGATCTCTGTTCCCAGGTGCAAGCCTGACCCTGGACCTCAACCACAATGCGATCCTGTGCTGGAGGGTGTGGTGTCAAACCCAGAGAACTGTGGGAGAATAACTGACACAAATGGACCATTTAGGGACTGTATAAATGTGGTGGACCCGTTGCCTTTCTTCCAGAGCTGTGTGTTTGATATGTGCCGTTATCAAGGGCTGCAGCAGGTTCTTTGTGACCAGCTTCAAGCTTACACTGATGCTTGCCTGAGTGCAGGTGCACCTGTCCATCAGTGGAGGGAGCCAGACTTCTGCCCTCTAGTATGTCCTCCAAACAGCCATTACTCCATTTGTGTGAGCTCCTGTCCAGAGACATGTCTGGGTGTCAATGGACCACCGGGCTGCAGTGAGAAGTGTGTAGAGGGCTGTGAGTGCGACACTGGCTTCATCCTCAGTGACAACAAATGTGTTCCTGTTAAAGACTGCGGCTGTGTGGACCCCTCAGGCTCCTACCATCCAGTAAATGAGAGCTGGTATCTGGAGGGCTGTACGCAGAAGTGTACATGTGAGGGTGGAGGAACTATTCAGTGTTACAACACCAGCTGTCTTCCTACTGAGAGCTGCCAAATTCAAGATGGAGACTATATCTGCAAACCACTTGGTACAGGCATTTGCTCTGTTTCTGGTGATCCTCATTATACCTCCTTTGATGGCAAAACACATCACTTCATGGGTGCCTGCTCCTACACTCTCACTAAGCCCTGTAATGAGACCTCCGGCTTGCCATACTTTTCTGTGGAGACACAGAACGAGCACAGAGACAATAATAAGAAAGTGTCTTATGTAAGATCTGTTATCATCAATGTCCACGACACAACAGTCATTTTGGGCAAGGGTCGCAAAGTACAGGTGAATGGAGTTCAGGTCACTGTGCCTGTCACACTTCCAAACGGTATTAAGATCTTCCTAAGTGGCAAATTTGTGGTGCTTGAGACAGACTTCGGATTGCGTGTCCGTTTTGATGGAAATCATCATGCAGATGTCACCCTGCCTTCCTCCTACAGCGGACTGTTATGTGGACTCTGTGGAAACTATAATGGTAATCTTAATGATGATAACATCAAGTCAGATGGAAAGCCAACAGACAGCACCAATGAGCTTGGAGAGAGCTGGCAGGTGCCCGATGACAGACCAGATTGTACTCATGGTGGAGGAGATATTGAATGCGATGACAAGATCCAGAGTGAAGCTCAGAAACCTACTAGCTGTGGCATGATCAGCGACGAAAATGGAATCTTCAAGCCATGTCATGCAGTGGTGCCGCCTAATCCTTACTTAGAGAACTGTGTGTTTGATCAGTGTGGCACTGGTGGCGCCACAGTGGCACTGTGCCAAGCTATTCAAAGCTATGCTGACCTGTGCGCTCAAGCTGGGGTGCCAATTAACTGGAGAAATAACACCTTCTGCCCTATTAAATGTCCGGTTGGTAGTCACTATGAGCCTTGTGGTTCAGCGTGTCCAGCGAGTTGTCAGGACCCTGGAACTGAAGGCACCTGTACTGAGCCCTGTGTTGAGGGATGTGTGTGTGACCCTGGTTTTGTCCTCAGTGGAGACGAGTGTGTGCCCTTCAGTGATTGTGGTTGCACTGACAGAGATAACAACTACAGGCCTGTTGGAAACAGCTGGTTCACAAAAGATGACTGCACAGAGCGCTGTGTTTGTTCACCTTTCAATACCGTGACATGCGAAGCATGGCAATGTGGTCCTGCTCAGGAATGTAAGGTTAATGAGGGTCAGCTGGGCTGTGTGAACACAGGAGTGGGCATATGCCACATTGCTGGTGATCCTCATTACTACACCTTTGATGGGATCATGCACACCTACATGGGTACCTGTACTTACACGCTGGTGGCGATATGCGACATCTCCATGGTGACACCCTTCACCATTGTGGCCAAGAACGAAGAACGCGGCCAACCAGAAGCTTCGTATGTTCGCTCCGTGACCGTCTACCTGCCCACTGCCAACATCACCATCAGCAAGAACGGAAGAGTACTGCTGAATGAACGCAGGATAAAGACCCCCTACGACATCACTGCAGCCAAGGCACGGGTGTTTACCAGTGGAGTAAACACCGTACTAGACACTGACTTTGGCCTGATTGTGAAGTTTGATGGAGTGCACCATATTGAGATCACAGTGCCTGGAGACTATTTCAACAAGGTGTGTGGAATGTGCGGTAATTACAACGGCGATTCCTCTGATGATAACTTGATGCCTGATGGCAAACCGGCTGAAAATGCCATTGAACTTGGTAACAGCTGGAAAGCAGAAGGAGACAGTGATCCTAGCTGCCAACCTGATCCACGACCTGAAGACATACCCAACTGTGACGAGAATGAGGACGAAATCTACAAGTCACAGTGTGCGGCGTCAATCCTGTCTGATCTCTTCAAGCCCTGTCACTCTCTCATTCCTCCAGAAGCCTTCCTGGGGAACTGCGTTTATGACATGTGCGAATATGATGGCATGCAGTCGACTCTGTGCGATAACGTTGAGGCTTACGCCCAGGCCTGTCATAGCGCTGGAATCACGATCAGCTGGAGGAACAGCACATTCTGCCCTCTCCCGTGCCCACCAAACAGTCACTATTCTGAGTGCACAGCACCATGTCCTCCTACTTGTGCCGACCTCTTCCCCATATTCTGCCCATTACCACCCAATAGCTGTGTCGAAGGCTGTCAATGCAATGCAGGCTTCGTGCTAAGTGATGGCAAGTGTGTTCCTCTCTCAAGTTGTGGGTGTGTTGACAGCAATGGAGAGTATCATGAGGTGGGAGATTCGTGGATAACTGACCACTGCGAACAAAGGTGCAGCTGCAGCCTTGGAGCAGTGCTGTCCTGCACATCTTTTGAATGCAATGACAACTCAATCTGTGATCTTGACAGCAGTGGAGACCGTTACTGCAAACCCGAGAAATTCGATGACTGCAATATTGCTGGGGACCCTCACTATCGAACCTTTGACAATTACAATCACCACTACCAGGGAGCATATACCTATGTATTAACCCAAGGAAACAATCTGCCAAGCTCCCTCACTCCTTTCAGGGTCCGCGGAAAAAACCAAAGGCAGGGAGGCATCGGTCGGGTGTCCCTCCTGCACGAGGTCTATGTGGATGTGTACGGCATTACTGTTCGCATACAGCAGAAGAAGAAAGTGCTGGTCGATGGCGAGAAAGTTGGTCTACCATACAGTCCTGTAAAGGGAGTTACCATAAAAACAAAGTCTCGCTTTGTTATGCTCACAACTGACTTTGGCCTTTCTGTGCGCTTTGATGGCAGTTCCCATGGAGTGGTGAGACTGCCTAGTGTATACAGATCTCATGTGCTCGGTCTGTGTGGTAATTATGATGGACGCACCAGTAATGAGTACACAAAACCAGATGGCACAGTTACTCGCAACCTCAATGAGTTTGGAGACAGCTGGAGAATAACGGACAAAGATGGGGCGAGTCTTCGTACCACATCCCTACCAAAGATGGTGCACCTGCACAAGCGTGAAGTAGAGGCCGATCCAGATTCAGGGTTTGAGACGACGGGCTGCACAAACGCTCAGCTGGCTGAGCTGAATGGGACTAAACAGTGTGGGGCACTCAGTGACCCTACTGGTCCTTTCACTGCCTGTCATGCTGTGGTCAATCCAGACGTGTTTCAGGAGGACTGTGTGTTTGACCTGTGCGCTGAGCAGGGCAGTGAAATGCTGCGGTGTGAAAATTACGCTGTCTACGCTCGGGCTTGTCAAGATCAGGGTGTCACATTAGGGCTATGGAGACAAGAGTTGAATTGCGGTCTGCAATGTGAAGCCAACAGCAACTACTCCACCTGTATGACTCCATGCCCGGCGTCATGCGCAGACCTGGCGGCTCCTTCAGAGTGCGAACAAACAGAGTGTGTGGAGGGATGTAAGTGCCAACCTGGCTTTGTCCTGAGCGACCAAGACTGTGTGCCTTACAGCCAGTGTGGATGCACTTACCTAAATCGCTACTATCTGCTCAAAGAGACATTTGTCACTGAAGATTGTTCACAAAGTTGTGAGTGTACCACAACTGGAGCTGTGTGTCAAACAAAGAGCTGTAGAGACAACAAGATCTGCACTGTCTATGAGACCAAACGCGACTGTTATGAAGCGAGTCCATGTTTGAGCTCGCCCTGTGAGAACGATGGTACCTGTGTGGAAAAACCAGACGGTTCTGGGTACACCTGCACTTGTGCTGAAGGTTTTGAGGGCACAAATTGTGAGCTCTTTAAAATCCCCACTGAGGAAGGCCTGGATAAAACATCTATTATCTTGATTGGAGTCCTTGTGCCGCTTGGTGTCATCCTCATAGTCACTGCAATTGTGTGCATTTACAAGAAGTGCAGCCGCAAAAAAATGATTTATGATACAAGTAAATTTGAACTGAACAAAACAGAACATCCCTATGAAAATCTGGATGATATTAAGAAGCAAGAAGAGGACAACAGCGTGATGAAGGCAACAACATTCTGAAGTGGTTTTTGATGCTGATTTGCTGATATGTGAAGATTTTGACTATATTTATTCACTTTAAATGTCTTTGTGGAATATGTGAACTGGCAAAACCTCTGTTAATAGTTTTTCAACCTTTCAGTAACTTATTTGTAAACTTTTATAGTAATTTTTGTTGTCAGGTGTGATATAATTGGGTGAAGTGCAATTATCAAATGTCTGTGAACATCTGATATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_02476591_02498283.mRNA True 6642 mRNA 0.48 42 2476591 2498501

Neighbor

gene id symbol gene type direction distance location
CI01000026_02400893_02403816 VGF coding upstream 72760 2399889 ~ 2403831 (+)
CI01000026_02351177_02371429 NA coding upstream 104773 2351104 ~ 2371818 (+)
CI01000026_02332785_02336722 NAT16 coding upstream 139645 2332203 ~ 2336946 (+)
CI01000026_02318608_02319349 NA coding upstream 156717 2318608 ~ 2319874 (+)
CI01000026_02249557_02256584 NA coding upstream 219605 2247478 ~ 2256986 (+)
CI01000026_02559910_02563125 MPDU1B coding downstream 61342 2559843 ~ 2563679 (+)
CI01000026_02602796_02611957 TNK2B coding downstream 104295 2602796 ~ 2612380 (+)
CI01000026_02650632_02651292 NA coding downstream 152131 2650632 ~ 2651507 (+)
CI01000026_02659356_02660297 NA coding downstream 160104 2658605 ~ 2660829 (+)
CI01000026_02692703_02703519 TP53I11, TP53I11A coding downstream 194202 2692703 ~ 2703741 (+)
G127614 NA non-coding upstream 31540 2444817 ~ 2445051 (+)
G127610 NA non-coding upstream 37415 2438885 ~ 2439176 (+)
G127609 NA non-coding upstream 37861 2438394 ~ 2438730 (+)
G127608 NA non-coding upstream 38221 2438074 ~ 2438370 (+)
G127519 NA non-coding upstream 49585 2393683 ~ 2427006 (+)
G127623 NA non-coding downstream 15730 2514231 ~ 2583751 (+)
G127652 NA non-coding downstream 74493 2572994 ~ 2574915 (+)
G127710 NA non-coding downstream 132594 2631095 ~ 2631370 (+)
G127646 NA non-coding downstream 148608 2647109 ~ 2648639 (+)
G127670 NA non-coding downstream 162498 2660999 ~ 2661597 (+)
G127531 NA other upstream 164456 2309322 ~ 2312135 (+)
G127500 NA other upstream 530152 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1698794 776757 ~ 777830 (+)
G126556 NA other upstream 1721428 754791 ~ 755163 (+)
G127979 NA other downstream 1254050 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1789372 4327206 ~ 4332085 (+)
G128137 NA other downstream 1932061 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 2057275 4555776 ~ 4557613 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033743 zanl coding NC_007118.7 CM002891.2 26326462 ~ 26365420 (+)