G127610


Basic Information

Item Value
gene id G127610
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2438885 ~ 2439176 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU144993
GTTCAAAAGACCTATGATCATAAGTTTTAAAACAACATGTAATATCCATAAGACTTTGTCTAGTATTATAACAATGTTTCTCAACCTAGAGAAATATGCATTAAAATATGCATGAGCTCTTTTATTGATTATCTTATGAACCATTTTAGTTTAAGATGTGCTACTATGCTTTCTAGAGGTAACCAGTCAAGATGTCTAAAATGGGATACATCAACATGTGTAAAACTACTAAAACCTAAAACTAACCTTATCAATTTATTTTGAGATTTTTGTAACTTATCCAATACACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144993 True 292 lncRNA 0.29 1 2438885 2439176

Neighbor

gene id symbol gene type direction distance location
CI01000026_02400893_02403816 VGF coding upstream 35054 2399889 ~ 2403831 (+)
CI01000026_02351177_02371429 NA coding upstream 67067 2351104 ~ 2371818 (+)
CI01000026_02332785_02336722 NAT16 coding upstream 101939 2332203 ~ 2336946 (+)
CI01000026_02318608_02319349 NA coding upstream 119011 2318608 ~ 2319874 (+)
CI01000026_02249557_02256584 NA coding upstream 181899 2247478 ~ 2256986 (+)
CI01000026_02476591_02498283 NA coding downstream 37415 2476591 ~ 2498501 (+)
CI01000026_02559910_02563125 MPDU1B coding downstream 120667 2559843 ~ 2563679 (+)
CI01000026_02602796_02611957 TNK2B coding downstream 163620 2602796 ~ 2612380 (+)
CI01000026_02650632_02651292 NA coding downstream 211456 2650632 ~ 2651507 (+)
CI01000026_02659356_02660297 NA coding downstream 219429 2658605 ~ 2660829 (+)
G127609 NA non-coding upstream 155 2438394 ~ 2438730 (+)
G127608 NA non-coding upstream 515 2438074 ~ 2438370 (+)
G127519 NA non-coding upstream 11879 2393683 ~ 2427006 (+)
G127597 NA non-coding upstream 51302 2387323 ~ 2387583 (+)
G127593 NA non-coding upstream 55544 2383091 ~ 2383341 (+)
G127614 NA non-coding downstream 5641 2444817 ~ 2445051 (+)
G127623 NA non-coding downstream 75055 2514231 ~ 2583751 (+)
G127652 NA non-coding downstream 133818 2572994 ~ 2574915 (+)
G127710 NA non-coding downstream 191919 2631095 ~ 2631370 (+)
G127646 NA non-coding downstream 207933 2647109 ~ 2648639 (+)
G127531 NA other upstream 126750 2309322 ~ 2312135 (+)
G127500 NA other upstream 492446 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1661088 776757 ~ 777830 (+)
G126556 NA other upstream 1683722 754791 ~ 755163 (+)
G127979 NA other downstream 1313375 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1848697 4327206 ~ 4332085 (+)
G128137 NA other downstream 1991386 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 2116600 4555776 ~ 4557613 (+)

Expression


Co-expression Network