G127710


Basic Information

Item Value
gene id G127710
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2631095 ~ 2631370 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145110
CTAACTCAATCAGAGCAGCTGAGTCTTTAGACGTTTGCAAGAAACAGCTGAAGATGCATCTTTTTTGTCAACAGTTGACCCAATAATACTAACACTATACCATATATCTATTCAAAAAAAAAAAAAACTTGCCATGTGTACTGTGCTAGACTAACTGCAACTAGTCACAGCACTTTCACATTGTTGCTGTATTGTTGGTTTGATTGCTTCTATTGTTTTCCTCATTTGTAAGTCGCTTTGGATAAGCGTATGCTAAATGATTAAATGTAAGTCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145110 True 276 lncRNA 0.35 1 2631095 2631370

Neighbor

gene id symbol gene type direction distance location
CI01000026_02602796_02611957 TNK2B coding upstream 18715 2602796 ~ 2612380 (+)
CI01000026_02559910_02563125 MPDU1B coding upstream 67416 2559843 ~ 2563679 (+)
CI01000026_02476591_02498283 NA coding upstream 132594 2476591 ~ 2498501 (+)
CI01000026_02400893_02403816 VGF coding upstream 227264 2399889 ~ 2403831 (+)
CI01000026_02351177_02371429 NA coding upstream 259277 2351104 ~ 2371818 (+)
CI01000026_02650632_02651292 NA coding downstream 19262 2650632 ~ 2651507 (+)
CI01000026_02659356_02660297 NA coding downstream 27235 2658605 ~ 2660829 (+)
CI01000026_02692703_02703519 TP53I11, TP53I11A coding downstream 61333 2692703 ~ 2703741 (+)
CI01000026_02722558_02725907 NA coding downstream 91188 2722558 ~ 2726305 (+)
CI01000026_02795613_02801257 TSPAN18, TSPAN18A, TSPAN18B coding downstream 164070 2795440 ~ 2801816 (+)
G127623 NA non-coding upstream 47344 2514231 ~ 2583751 (+)
G127652 NA non-coding upstream 56180 2572994 ~ 2574915 (+)
G127614 NA non-coding upstream 186044 2444817 ~ 2445051 (+)
G127610 NA non-coding upstream 191919 2438885 ~ 2439176 (+)
G127609 NA non-coding upstream 192365 2438394 ~ 2438730 (+)
G127646 NA non-coding downstream 15739 2647109 ~ 2648639 (+)
G127670 NA non-coding downstream 29629 2660999 ~ 2661597 (+)
G127669 NA non-coding downstream 76155 2707525 ~ 2708131 (+)
G127725 NA non-coding downstream 104609 2735979 ~ 2736398 (+)
G127728 NA non-coding downstream 110719 2742089 ~ 2742460 (+)
G127519 NA other upstream 204089 2393683 ~ 2427006 (+)
G127531 NA other upstream 318960 2309322 ~ 2312135 (+)
G127500 NA other upstream 684656 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1853298 776757 ~ 777830 (+)
G126556 NA other upstream 1875932 754791 ~ 755163 (+)
G127979 NA other downstream 1121181 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1656503 4327206 ~ 4332085 (+)
G128137 NA other downstream 1799192 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 1924406 4555776 ~ 4557613 (+)

Expression


Co-expression Network