CI01000026_03779693_03783517


Basic Information

Item Value
gene id CI01000026_03779693_03783517
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 3779609 ~ 3783929 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_03779693_03783517.mRNA
ACCCTAATGTCTTATGAGGAGATATGAATTACGATTTCATAATTTATGTCTATTCATCACCTTCAGGGAGATCCAGATCTCAAAGACATTAAACGAGGCACATTTTCATCTCTACTTTGACAGGGATGTACAATAAAAGTAAAGGAAAACTAGTACGCCAGATTACTTGCTAGCAAACAGAGCACTTGTACCCTCTGCATTGCCCCTAATGGTTAATCTCGGGTGGATCTCTGCCTTGATTGGTTAAGAGTCTCCGCAGGGCAGGTGAAAGCCCCACCAATTGCCCACCATGAAACAGTAACACTTTTATCAGTGAAGTAACAGCTAACAATTATATTACCAGAGCCAAACGCGGTCTCCTATCTCACCGCTAATCAAAACACAGCCCATCTGTTGTGTTGTTGCTCTCAAAATGACTGTTTATCTGAATATGGAAAACGCGAGCGGCGCGCGCAGAAGTGTGCTGGAGCCGAGAACGGATCGCCTGGAGCCGGACACCTCGCTCCTCAGGACGATGGTGTTAGACAAGGAAGAGGGATCACATGAGGGGGAAAGCGCGTACGGTACTCTAAAAGACTTCGAGTCGGGAGAGACATGCAGAATGCGGTGTACTTCTCTACTGTTCCCGTGTATGAGATATGATATTATCTGTTTAAAAGACGCCATGACACAATACCATACAGTACTTGCTCTTGAACTTTCTTACCATGACTTGGAGGAGGAAGTGGGGAAATGTTTTAAGAAATACGCTATTCAGCCATTTTCTTTCCCTTCAAGGTATTTAAAACTATCTGGATTGGGAGGAATAATTGGGTCCTCATTGTGGACTTGTTCAGGATTGATCATTCGCATCGCTGGGCTTCCTAAGAACCTGGTGAAGAGAAAAGAACACCATTCTATTCTTCATCCTGATGATAAATTCTTGGTTACCGTTCGCCATTTAATTTACGAGCCATGCATGCTGACTGACCAATGAAATCTGTTCGTTTGTAATGCGTGTATTTGAATGCAATGTTTCAAATGAATACTAGACCCCTGATCTGTCTGCCGCTGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_03779693_03783517.mRNA True 1060 mRNA 0.43 5 3779609 3783929

Neighbor

gene id symbol gene type direction distance location
CI01000026_03753185_03765875 LMO1, RBTN1 coding downstream 13734 3752581 ~ 3765875 (-)
CI01000026_03691072_03696628 NA coding downstream 81212 3690222 ~ 3698397 (-)
CI01000026_03620455_03641230 NA coding downstream 138154 3620184 ~ 3641455 (-)
CI01000026_03439507_03490314 PDE3B coding downstream 289295 3438795 ~ 3490503 (-)
CI01000026_03353132_03359434 NA coding downstream 420117 3352570 ~ 3359492 (-)
CI01000026_03918109_03925166 STK33 coding upstream 133832 3917761 ~ 3925211 (-)
CI01000026_03938864_03942893 RERGL, RERGLB coding upstream 154344 3938273 ~ 3942893 (-)
CI01000026_03950848_03969190 NA coding upstream 166365 3950294 ~ 3969190 (-)
CI01000026_03973706_04011187 ST5 coding upstream 189351 3973280 ~ 4011187 (-)
CI01000026_04035446_04036660 TMEM9B, TMM9B coding upstream 250499 4034428 ~ 4036660 (-)
G129460 NA non-coding downstream 140101 3639200 ~ 3639508 (-)
G129457 NA non-coding downstream 149236 3630120 ~ 3630373 (-)
G129451 NA non-coding downstream 162447 3616875 ~ 3617162 (-)
G129448 NA non-coding downstream 174582 3604819 ~ 3605027 (-)
G129444 NA non-coding downstream 184166 3595207 ~ 3595443 (-)
G129578 NA non-coding upstream 328694 4112623 ~ 4118180 (-)
G129579 NA non-coding upstream 335219 4119148 ~ 4119490 (-)
G129581 NA non-coding upstream 338467 4122396 ~ 4122695 (-)
G129603 NA non-coding upstream 410240 4194169 ~ 4195468 (-)
G129638 NA non-coding upstream 466988 4250917 ~ 4251178 (-)
G129476 NA other downstream 108725 3670574 ~ 3670884 (-)
G127418 NA other downstream 2043503 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 2777020 986182 ~ 1002180 (-)
G129658 NA other upstream 583367 4367296 ~ 4373069 (-)
G129750 NA other upstream 1029121 4785885 ~ 4820249 (-)
G130256 NA other upstream 2491582 6275511 ~ 6317154 (-)
G131742 NA other upstream 4522847 8306776 ~ 8307707 (-)
G132575 NA other upstream 5603222 9387151 ~ 9387716 (-)

Expression


Co-expression Network