CI01000026_03918109_03925166 (STK33)


Basic Information

Item Value
gene id CI01000026_03918109_03925166
gene name STK33
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 3917761 ~ 3925211 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_03918109_03925166.mRNA
ATCTTTTAGATGACACATACAAATGTGTCTGGAGCTGAAAAGAAAATGGCTTCTCAGTGGACTCGTGCAAACAGTGCCGAGAAGGAGGTGCCCCACACTCGCATTGAGGATGAATCCAACATACAGAAAATCTATTCCTTTGGGAGGAAATTAGGTCAAGGCAACTTTGGCGTCGTTTGCGAAGCCACTCACATTGAGACGCAGAGGAAGTGGGCAATTAAGAAGGTGAACAAAGAGAAGGCTGGCAGTTCTGGTGTGAAACATCTGGAAAGAGAAGTCAGCATCATGAAAAAAGTGAAACATGAACATATTATACATCTGGAGGAAGTCTTTGAGACACCAAAGAGGATGTACCTTGTGACTGAACTTTGTGAAGGAGGTGATTTAAAGGATCTCCTGCAGAAGAACAAGCACTTCTCTGAGGAGGAGACCAGACACATCATCAAAAGCTTGTCTGAAGCTATTGTATATCTGCACAAAAAAGACATTGTTCATCGTGACCTCAAACTGGAAAACATTCTTGTGAAGAGTTGTCACCACGGCAACGATAACGATATGGTCAATATCAAGGTCACAGATTTCGGACTCTCTGTGCAGAAGGGTGGTGTGGGCAGTGAAAACATGCTGCAGGCCACTTGTGGGACACCTATGTACATGGCACCTGAGGTGATTAATGGTCATGAATACAGCCAACAGTGTGACTTGTGGAGCATCGGCGTCATCATGTACATGCTGCTGTGTGGAGAGCCTCCATTCATATACAGCTCTAAGGAAAGGCTTTCTGACATGATTATGAAAGGAGAGCTCACTTTCTCTGGCCCTGTGTGGCACACCATTAGTGATGCAGCCAAAAATGTAATACGGTGTTTGTTAAAAGTTGACCCAGCTCACCGCATCACAGCCAATGAGCTGCTAGATAACCCTTGGATTTCGGGGGACACCTCAACCACTGTTACACAAACAAACGTCTTAGTGATGATGCGTGATGCGCTCCGGAATGCTCCAAAGGACGAAGAGAGTGTGGAGATGAACGAGGCGCTGCACAGCTTCTCTCTCACTTCCTCTCAGGATAAAGGGTCAGGGCAGAGTACTTCTGAAGAACTTTCAGTAACCCCAGCACCTCCTGATGACATCACAGACAGCAGCAGTAGCAGCAAACCCTCCACCCCAAACAAAAAGCCTCTGAAGAAAAAACTATCAGCCTCATCCTCTAATGGTGTTAAGAAGAGTGTGTCTGGTGCAAAGGCCTGCAGCACCAATACATCCACTGCACAGGTAACAAACCCCCTGCTCAGCCAAGCACAAAAAGCTACAGCAAGGCCTCCTCCATCTCGGGATCCTGTCTCAAAACATCATCGGCAGAAGCAGCCGCTGCAGCATCCAACTCAAGCAGGCACGAAAGCTTGTCCCCACGTCCCTCCACCTCTTCTATCCACCGTTCCACCAATCCAGCTTTTGGCTTCCGGGCTAAAAAACGCAGCTAGACCTTCATCCAGTGCCAAAGATGAGGAAGTCCTGGGGGTCACTGCGGCGTAGAGGGCCCGCTGGATACACAAATGACTCTTTAAGCCAAACCAGTGAATCAAATGTAAAACTACTTCCTCCAATGTGAATGCGTTTTTAGTCTTCTTAGTAGGATGTATTTTAACAGTTATTTTGCCCTTTGTATGAGTTAGACAGAAGCCTTTTATTTTGAGGATGAGCTGCTAGGTTTTTCGGGGGGTTGGTTGCTGCTTTATTTTTATGGACCTGGAACAGATGAACTCATCACTGGAAGAGCCCTGCATGGCACGAGATCGATTTGCCTGTTCATGGCAAGGCGCATAAGTCATCTTGAAGCACATTGAAATGCTATTAGGGAATGAATTCTCTATAGAGAATAAA

Function

symbol description
stk33 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in mitotic DNA damage checkpoint signaling. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human STK33 (serine/threonine kinase 33).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08813 STK33; serine/threonine kinase 33

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_03918109_03925166.mRNA True 1884 mRNA 0.46 12 3917761 3925211

Neighbor

gene id symbol gene type direction distance location
CI01000026_03779693_03783517 NA coding downstream 133832 3779609 ~ 3783929 (-)
CI01000026_03753185_03765875 LMO1, RBTN1 coding downstream 151886 3752581 ~ 3765875 (-)
CI01000026_03691072_03696628 NA coding downstream 219364 3690222 ~ 3698397 (-)
CI01000026_03620455_03641230 NA coding downstream 276306 3620184 ~ 3641455 (-)
CI01000026_03439507_03490314 PDE3B coding downstream 427447 3438795 ~ 3490503 (-)
CI01000026_03938864_03942893 RERGL, RERGLB coding upstream 13062 3938273 ~ 3942893 (-)
CI01000026_03950848_03969190 NA coding upstream 25083 3950294 ~ 3969190 (-)
CI01000026_03973706_04011187 ST5 coding upstream 48069 3973280 ~ 4011187 (-)
CI01000026_04035446_04036660 TMEM9B, TMM9B coding upstream 109217 4034428 ~ 4036660 (-)
CI01000026_04038343_04060958 SCUBE2 coding upstream 112289 4037500 ~ 4060958 (-)
G129460 NA non-coding downstream 278253 3639200 ~ 3639508 (-)
G129457 NA non-coding downstream 287388 3630120 ~ 3630373 (-)
G129451 NA non-coding downstream 300599 3616875 ~ 3617162 (-)
G129448 NA non-coding downstream 312734 3604819 ~ 3605027 (-)
G129444 NA non-coding downstream 322318 3595207 ~ 3595443 (-)
G129578 NA non-coding upstream 187412 4112623 ~ 4118180 (-)
G129579 NA non-coding upstream 193937 4119148 ~ 4119490 (-)
G129581 NA non-coding upstream 197185 4122396 ~ 4122695 (-)
G129603 NA non-coding upstream 268958 4194169 ~ 4195468 (-)
G129638 NA non-coding upstream 325706 4250917 ~ 4251178 (-)
G129476 NA other downstream 246877 3670574 ~ 3670884 (-)
G127418 NA other downstream 2181655 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 2915172 986182 ~ 1002180 (-)
G129658 NA other upstream 442085 4367296 ~ 4373069 (-)
G129750 NA other upstream 887839 4785885 ~ 4820249 (-)
G130256 NA other upstream 2350300 6275511 ~ 6317154 (-)
G131742 NA other upstream 4381565 8306776 ~ 8307707 (-)
G132575 NA other upstream 5461940 9387151 ~ 9387716 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location