CI01000026_03620455_03641230


Basic Information

Item Value
gene id CI01000026_03620455_03641230
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 3620184 ~ 3641455 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_03620455_03641230.mRNA
AGTTTCCCAAAGGCTTAATATAGAATAATAGGGATAATATTCCCTATTATCAGAATATGAGACCATGAACACATAATATGTACAATACAAGTCTATCTGATTTTAAACATTTGACTAAAAAAAAGGAACTAAAATCAATGCAATTATTTTGACTTGGGCCACATGACAATTTTATTATATCACTCTAAAAGAAGGTCACTGCTATTTTGCTTTCAGTCAAAAGAAATGAAGTTAAAGATCAGCTCTGAAGCCAAACATAACATCTGCCATGCTTTCAACTGGTGCTCAAAAAAAGAATCTGATACTATCATGTCACATATTTGGTGGCCAAAATTGTTCATCAGAGACCTGCAAACCGTCCCTGCAGGGGAACCGAGGTCAACATTCTTCCTAGCAGCGGTCAAAAACAGCGAACACGGTGGGATGTTGCTGGATCATACGCACTCTGCTACGCTCCAGCAGAGGGAGAGCAGGTGGAAAAGCAGCATGGCTGGCATTCTGTCTCCTCATTTTATGTCAATGGCTCAGAGATTCAAGCAAAAACTGGATCACAGAAGCACAAGCGATTTCAAGCCCATCAGTTCTAATCTAAAACAGTCTGGTGACCTCTTCATTAAAAACCAGTCAGTTTTACAATACAGATCAGGATCAGAAAGTCACAAGAAAGCATGTTCACATCTAGGAGTCTCAGAGAGTTTAGGTCTTAATGGGGCGGCAGGATCATTGGTTCTTCGAACCATTCGGCAAGGCACAGAGAAAACTGAAGGTGGCACTGTGTCCTTTTCCATTTCTCCAGCTTCTCATAAGCAAAGCAAAGACCAGATACAAGGTGCCTTTACTGCTCAAATGCTTGATTTACCTGAACAGACTTATCCAGTGCAGATCCTCAAGCGACACTATCAACATCTAAGAGGCATCCCTCTGGAGGAGTTTCAGAAGGTTAAACCTATGTTACTAGTGGGAGCTGATCATCCTCACCTTCTTTGCTCCAAGGATCGAGCTTCCCTTTCCATGGATCAGTTGTACAAGGATGTGAAGTTATGGCAAGTTGATGTACTTCCTTTCTCTCAGACTCCGAAGCATGCTTGTGTTCTAAACAAGATAAGGATGGTCTCGAGTAAAGGAGGATTTGAGATCTGGCAATGGGCTAGTAACCACGTCTCTGTGATGGACCACTTACCAGCAGAAGTTCGTTCAGTAGACACTGACCTGTGGTTAAGTCATGACTGCACAGATCCATGTGAAGGTACCCTTGGACCCTTGGCATTGCTTGTTTTATATCGAATACTTGCTCGTCAATATGAACCTCTGGTTTTCATCATTCCATTCATGACACGTGCTAAAATTCTTCTGCAACAGTTATGGATGAAGCCTACTAGAGGATGCGATAATCCAGATATCCCAGAGGGAATCAAGGCAGCCTGGATGGCATGGGAAGGAGAGTTTCCAGATTTGGTTAAGATCCAACCTTTTTTTCCCAAACTGATTCCCCTGTCTGAAGTACTTCCCATGATGGGGATCTCTTTTTGGTGTGTTTGGGCTGCATACACCACCCCAGAACTCCCAGTGGTGGCGGCGTCCATTATGAAGTCTCCAGGAGTGACGGCTGACGCTGCAGAACCTCCTGAGGTAGTGGCACTCGATGCTGTGCCTCCGGAAGCAGCGGTGCTCTCTTCAGCTCCTTGCGTGGTGGTGGCGCCCAGCAATTCATGTCATGTCATGGTCAAAGGAACCATTGCTGAACTCTCCCTGTATTCTGATGGTACTACTGTAGAACCTCCAGAGGTGGCGGCATCTGCTGCAGACCCTCGAGAGGTGTCAGTGGATGCAGTCTGTGAATTTCATGACTGTTTTGCTACAGCTACAAGGGCCATTCATGACCTCTCTTCCCTACCAGTCACTGCCTTGGAAACCTTAAATGAGCTTTTCATATGCTCTGTTAATCCTGTCATTGCTAAGGAGACCATTAGTGAACAGTCTGTCTGTCCATGTACAAAACAGATGACTAAACAATGTGGAGCCAAATGTGTCTTATACAAGATTTTCTTGAAGGATCTGCAGTGGCTCAGTGACGTACTGGTAGTTATAAAAATTATAAATAGAAAACTAAAACATGTTCAGAATAACAATAATGCCGAGTTCTATACCCAGCTAGAAAATCTATTTGCATGGGCTTGGCTTGGCAAGTACAAAGATGCACTCCAAGGTGCAGCTAATTTTAGTTACCATGGTAACATATATGGGTGCATGGTTGTCAAGCAATATTACTGGTTACTTTTTGACATTTCTGATTACGCACGCTTGTCTGTGAGTGTGTCTGTGTTTCACACTGTCGCGACTGCTACTAATGAGATGACGTCATTGCAACGTCTGGCTGCTTCATCTAACACAAGCACTGCAACACTGTATCCCACAACCATAGCAACAAGTGACTAATTACTGCCAAAAAAAAAAAAAGCCAGAACAAAATGGAACACAGTGTCAGCCTATGAAGCACATCATGTGCAGCCATCCGCTCTGCATTGTAGTCGTACTCACATACGCAGATGAGCTATGAAAGGTGATGCCTTATCACTACACTGCAGAGAGGCAACACGAGAATGGAGAGAAGAGCGATGCAGAGCAACATGAGTTTAACTGCCCATGCTGATATAAATGTGTCTGTATTTACAATCTATACATTATATTTTCATATAGATAAAATAAA

Function

NR:

description
hypothetical protein EH28_18286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_03620455_03641230.mRNA True 2707 mRNA 0.43 12 3620184 3641455

Neighbor

gene id symbol gene type direction distance location
CI01000026_03439507_03490314 PDE3B coding downstream 129870 3438795 ~ 3490503 (-)
CI01000026_03353132_03359434 NA coding downstream 260692 3352570 ~ 3359492 (-)
CI01000026_03309007_03342583 NA coding downstream 277333 3308515 ~ 3342851 (-)
CI01000026_03146190_03159300 NA coding downstream 460444 3145706 ~ 3159740 (-)
CI01000026_02939243_02946057 NA coding downstream 672941 2938778 ~ 2947243 (-)
CI01000026_03691072_03696628 NA coding upstream 48767 3690222 ~ 3698397 (-)
CI01000026_03753185_03765875 LMO1, RBTN1 coding upstream 111126 3752581 ~ 3765875 (-)
CI01000026_03779693_03783517 NA coding upstream 138154 3779609 ~ 3783929 (-)
CI01000026_03918109_03925166 STK33 coding upstream 276306 3917761 ~ 3925211 (-)
CI01000026_03938864_03942893 RERGL, RERGLB coding upstream 296818 3938273 ~ 3942893 (-)
G129451 NA non-coding downstream 3022 3616875 ~ 3617162 (-)
G129448 NA non-coding downstream 15157 3604819 ~ 3605027 (-)
G129444 NA non-coding downstream 24741 3595207 ~ 3595443 (-)
G129403 NA non-coding downstream 106358 3513071 ~ 3513826 (-)
G129406 NA non-coding downstream 110189 3509757 ~ 3509995 (-)
G129578 NA non-coding upstream 471168 4112623 ~ 4118180 (-)
G129579 NA non-coding upstream 477693 4119148 ~ 4119490 (-)
G129581 NA non-coding upstream 480941 4122396 ~ 4122695 (-)
G129603 NA non-coding upstream 552714 4194169 ~ 4195468 (-)
G129638 NA non-coding upstream 609462 4250917 ~ 4251178 (-)
G127418 NA other downstream 1884078 1735777 ~ 1736220 (-)
CI01000026_00986386_01002180 NA other downstream 2617595 986182 ~ 1002180 (-)
G129476 NA other upstream 29119 3670574 ~ 3670884 (-)
G129658 NA other upstream 725841 4367296 ~ 4373069 (-)
G129750 NA other upstream 1171595 4785885 ~ 4820249 (-)
G130256 NA other upstream 2634056 6275511 ~ 6317154 (-)
G131742 NA other upstream 4665321 8306776 ~ 8307707 (-)

Expression


Co-expression Network