Gene
RNA
| Item | Value |
|---|---|
| gene id | G128340 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 4935158 ~ 4955766 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform X9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU145817 | True | 6020 | lncRNA | 0.40 | 4 | 4935158 | 4955766 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_04905238_04906008 | NA | coding | upstream | 27822 | 4905067 ~ 4907336 (+) |
| CI01000026_04891501_04898456 | PSTPIP1B | coding | upstream | 36123 | 4891501 ~ 4899035 (+) |
| CI01000026_04872499_04877980 | NA | coding | upstream | 56807 | 4872499 ~ 4878351 (+) |
| CI01000026_04848513_04851412 | ISL2, ISL2B, ISL2A | coding | upstream | 83315 | 4848513 ~ 4851843 (+) |
| CI01000026_04820538_04825963 | FBXO22 | coding | upstream | 108729 | 4820132 ~ 4826429 (+) |
| CI01000026_04974839_04980270 | NA | coding | downstream | 19073 | 4974839 ~ 4980909 (+) |
| CI01000026_04985417_04990345 | NA | coding | downstream | 29651 | 4985417 ~ 4990376 (+) |
| CI01000026_05004965_05013169 | NA | coding | downstream | 49199 | 5004965 ~ 5013588 (+) |
| CI01000026_05021876_05024530 | NA | coding | downstream | 66110 | 5021876 ~ 5025921 (+) |
| CI01000026_05029732_05031509 | NA | coding | downstream | 73756 | 5029522 ~ 5032401 (+) |
| G128344 | NA | non-coding | upstream | 6327 | 4926536 ~ 4928831 (+) |
| G128359 | NA | non-coding | upstream | 10417 | 4924530 ~ 4924741 (+) |
| G128358 | NA | non-coding | upstream | 10901 | 4923417 ~ 4924257 (+) |
| G128354 | NA | non-coding | upstream | 18847 | 4915680 ~ 4916311 (+) |
| G128331 | NA | non-coding | downstream | 16033 | 4971799 ~ 4972504 (+) |
| G128320 | NA | non-coding | downstream | 63732 | 5019498 ~ 5020168 (+) |
| CI01000026_05101040_05111720 | LIPC, LIPCA | non-coding | downstream | 156865 | 5101040 ~ 5113233 (+) |
| G128393 | NA | non-coding | downstream | 181239 | 5137005 ~ 5137785 (+) |
| G128461 | NA | non-coding | downstream | 306929 | 5262695 ~ 5264619 (+) |
| CI01000026_04556074_04556964 | FOXB1B, FOXB1, FOXB1A | other | upstream | 378841 | 4555776 ~ 4557613 (+) |
| G128137 | NA | other | upstream | 503957 | 4430562 ~ 4431201 (+) |
| CI01000026_04327206_04331151 | DOK4, DOK5 | other | upstream | 603073 | 4327206 ~ 4332085 (+) |
| G127979 | NA | other | upstream | 1172172 | 3752551 ~ 3762986 (+) |
| CI01000026_02659356_02660297 | NA | other | upstream | 2274329 | 2658605 ~ 2660829 (+) |
| G128585 | NA | other | downstream | 994047 | 5949813 ~ 5950122 (+) |
| G128601 | NA | other | downstream | 1028113 | 5983879 ~ 5991761 (+) |
| G128757 | NA | other | downstream | 1370430 | 6326196 ~ 6326785 (+) |
| G130552 | NA | other | downstream | 2139287 | 7095053 ~ 7096652 (+) |
| G130967 | NA | other | downstream | 3232608 | 8188374 ~ 8189073 (+) |
