G128354


Basic Information

Item Value
gene id G128354
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 4915680 ~ 4916311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145833
GATACATCGATCTAATGTCAAACGATACGATGCATCGATGCAACACGTAAAAATCGATACCTGTGGCTATTTATGTATTTCAAAGGCACCTTCGTTTTAACACTCTCCTTATTTTTACACAATGTCAGTCTATGCATTATTGCCAACGCGTGCATTCTGGTTTAAACTACCTTTCAGAGATTGTGAAAGACGCTCGGGACAGTAGATGGAACTGTCACTGTCCGGATCGAGCCAGTGCTGAATTTTCACGAAAGTTTATAATTTGCTCGTGTTTAAGCCTTGCAAAAAGCAGCACGCACATATCTCAAACAGTGTCTGTTAGATCACAGCACTGGAGAATAGAGCGCTATGAATCGTTCTTCACACACACAGTAAACTAAAATTTAAAACTGTTAAAAGAAAATGCTCAAAAACTGCTGCGTAGGAGCGCTGCGCGCTGTGACTCTGTGTTGCTTCAAGCGCATCATTCTGCACACGGGATGCGCATAAGTGCTTTGTGCCGCTCTGCATTGGAGCCTTTATAATACTTTTGCACAATGAAAGAATATTAATAGCCTGTCTTGTTCTGTCCTACCTATAATATGTTGTTGCTTCATTAAAAAGCTGCGCTATACATTTAAAAGGAATGTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145833 True 632 lncRNA 0.41 1 4915680 4916311

Neighbor

gene id symbol gene type direction distance location
CI01000026_04905238_04906008 NA coding upstream 8344 4905067 ~ 4907336 (+)
CI01000026_04891501_04898456 PSTPIP1B coding upstream 16645 4891501 ~ 4899035 (+)
CI01000026_04872499_04877980 NA coding upstream 37329 4872499 ~ 4878351 (+)
CI01000026_04848513_04851412 ISL2, ISL2B, ISL2A coding upstream 63837 4848513 ~ 4851843 (+)
CI01000026_04820538_04825963 FBXO22 coding upstream 89251 4820132 ~ 4826429 (+)
CI01000026_04974839_04980270 NA coding downstream 58528 4974839 ~ 4980909 (+)
CI01000026_04985417_04990345 NA coding downstream 69106 4985417 ~ 4990376 (+)
CI01000026_05004965_05013169 NA coding downstream 88654 5004965 ~ 5013588 (+)
CI01000026_05021876_05024530 NA coding downstream 105565 5021876 ~ 5025921 (+)
CI01000026_05029732_05031509 NA coding downstream 113211 5029522 ~ 5032401 (+)
G128316 NA non-coding upstream 25983 4889446 ~ 4889697 (+)
G128273 NA non-coding upstream 166491 4748884 ~ 4749189 (+)
G128223 NA non-coding upstream 268780 4643897 ~ 4646900 (+)
G128222 NA non-coding upstream 272732 4641378 ~ 4642948 (+)
G128358 NA non-coding downstream 7106 4923417 ~ 4924257 (+)
G128359 NA non-coding downstream 8219 4924530 ~ 4924741 (+)
G128344 NA non-coding downstream 10225 4926536 ~ 4928831 (+)
G128340 NA non-coding downstream 18847 4935158 ~ 4955766 (+)
G128331 NA non-coding downstream 55488 4971799 ~ 4972504 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 359363 4555776 ~ 4557613 (+)
G128137 NA other upstream 484479 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 583595 4327206 ~ 4332085 (+)
G127979 NA other upstream 1152694 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 2254851 2658605 ~ 2660829 (+)
G128585 NA other downstream 1033502 5949813 ~ 5950122 (+)
G128601 NA other downstream 1067568 5983879 ~ 5991761 (+)
G128757 NA other downstream 1409885 6326196 ~ 6326785 (+)
G130552 NA other downstream 2178742 7095053 ~ 7096652 (+)
G130967 NA other downstream 3272063 8188374 ~ 8189073 (+)

Expression


Co-expression Network