CI01000026_04820538_04825963 (FBXO22)


Basic Information

Item Value
gene id CI01000026_04820538_04825963
gene name FBXO22
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 4820132 ~ 4826429 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_04820538_04825963.mRNA
GCATAAATGCAATGCACAACCCTCAGGTACACAAATATAAATGTTTACATTTTTTTTTGCAACTGCCAAAATTATCATTATACCTGAATAAAGTAATTGAATCTCAAAATGCCTAATGCCTTGTTTCTTTATTGTCCAAATATATAAGCTATATATACAGTATATGTGACATTGACAGTAAACTGTAAAAATAAAATAAAGGCTGACTTTACTATACTGTATATAGTTTCTTGAGTACATAATCTTTACTGAAAACATGTATTTACAACAGTTCAAAAATACAAGCACAGTAAACATGTTCTAGTCTTAGTTGTGTTTCTATGAGGTCTAGCGTTCAGACTTTTAAACAACTTCCGGTTCCGCTTCCGTGTGTAGTGTCAAATGTTAGAAGAGAATCCGTGTGAAAATGGAAGGGGATACAGCTTCTCTAAACATCTTTGGGGAAAGTAAAGCAGGATATGTCCTGAGTAATGTTGCCGAGGTCGTGGAGCGGATTTTGACATTTGTGCCGACTAAAAATCTCTTCCGGATAGCAAGGCTATGGAGGAATTGTGCACGCAGAGTCCTGAGGATGAGGCAGAGATTTACCTGGCTCTCCGCCTCTGGCTCATCCATATACGAGGAGCATGTTTTGCTTAGATCTATGGCACAAGACTTGGAGAAAATCTGTCTGCTGCCCCAGACAGCTCTCGTAATGGTAAATCATGAGAACTTCAGAGGGTCTGTTAGTAACAGACACAGGAAGGCCAGGAGGTGTGAGGATGAAGTGGAGCCAGATCCTCTTAAGAAGCTGAAACGCTTACTACCTAGCAGTTGTGACATACTAGGCATAGTCGCACCAGGAACTGTGGTGACCCCCAGTGGTTCACCCAGCAGCCCCCCACAGGAGCATGAGGAGGGTGAAGCTGGCTTCAGTCTGCTTTTCTCTGCCATGGATGGGATCACCATCCGGCCATTCCACTTCTGCAAAAAGACCCTCAGTGAAACGGCAATGCAGGAAGCAGGGTTGATTAATAACCCTGATCTAAAGGTGGTGCTGTTGTTCGACTACGACACCTATAAATCTGGAGGTGGACGTTTTCTTAACAAGCTTCTGGAACCGCTTTCCCAAAGTAATGTACTTATTGTTGGAGGACAAGTTGAGGATGTCTTTTCCATTAACATAAACTGCTGTCCTCCGGGCTCTTTTGGGGCAGTAGGGCTGACTTTCAGCGGCTCCAAGATCCAGGGTGCCTCGGTTCTAATAGAACAGGACGTAAACAGCCCGAAAGCAGCAGAAGCCACTATCCAGCGACTGAAGGCTGCTAATATCCCAGAGAAAAACACCGTGGGCTTCATGTTTGCTTGTGTGGGCCGCGGCCACAACATGTACAATGACCAGCGTAACGTGGAGGCTGACGCCTTTCGGAAGATCTTCTCCAACATTCCGCTCTTAGGATTCTTTGGAAACGGGGAGATCGGCTGCGACCGTATTGTCAAAGAGAACTACACATTGAGCGAGACAGATGCTGATGGACTACAGCACTCTTTTACTACAGTCATGAGTCTGGTGCATTTTGGCTAACACAAACTCTTGTACTGCAAGTGACTAGAAAACCACTAGTTAACATGAAGAAGTTTCAGGACAGACACCGGCTGCTTGTTTAAGTTAACGGAGCAGGTCCGATGTTGATCAGGTGTATTTCTTCTAGGTTCTTTCCCTTGACTTATTTTCTTTAAATCAGAATGTCAGAGGGACATTTAGCAGTTTTTTTGCAAAGAATATTTACAAGATTGCAATGTAAGAGCCCCTGCTGTGAACTAAAAGTGGCGGGTACAATTCTTACACCTTGTTTGTTAAGGTCATTACTTACAGAGCGGCTGTGAAGAACAGTTAAGATTTAGTTTGAATGGCATGGTGCTAAACCTTGACTTTAGACTTCAGTTATATGTTAACTCTCTTTGTGTAGAGCAGGGCTGAAATCTGTCAGCTGATCAGATTTCTTGTGGGCTCACTCAGGCTTTATACCATTCATTCAGGCATTTTTGAA

Function

symbol description
fbxo22 Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; protein polyubiquitination; and regulation of skeletal muscle fiber development. Orthologous to human FBXO22 (F-box protein 22).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_04820538_04825963.mRNA True 2030 mRNA 0.43 7 4820132 4826429

Neighbor

gene id symbol gene type direction distance location
CI01000026_04812926_04818639 TPM1.L, XTM4, TPMA, TPM1-2, TPM1 coding upstream 968 4812926 ~ 4819164 (+)
CI01000026_04773209_04807191 TLN2A, TLN2 coding upstream 12570 4771859 ~ 4807562 (+)
CI01000026_04593208_04599259 ITLN4 coding upstream 220595 4593130 ~ 4599537 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A coding upstream 262519 4555776 ~ 4557613 (+)
CI01000026_04503901_04507434 RAB8B coding upstream 311439 4503901 ~ 4508693 (+)
CI01000026_04848513_04851412 ISL2, ISL2B, ISL2A coding downstream 22084 4848513 ~ 4851843 (+)
CI01000026_04872499_04877980 NA coding downstream 46070 4872499 ~ 4878351 (+)
CI01000026_04891501_04898456 PSTPIP1B coding downstream 65072 4891501 ~ 4899035 (+)
CI01000026_04905238_04906008 NA coding downstream 78638 4905067 ~ 4907336 (+)
CI01000026_04974839_04980270 NA coding downstream 148410 4974839 ~ 4980909 (+)
G128273 NA non-coding upstream 70943 4748884 ~ 4749189 (+)
G128223 NA non-coding upstream 173232 4643897 ~ 4646900 (+)
G128222 NA non-coding upstream 177184 4641378 ~ 4642948 (+)
G128219 NA non-coding upstream 188063 4631834 ~ 4632069 (+)
G128218 NA non-coding upstream 192668 4625384 ~ 4627464 (+)
G128316 NA non-coding downstream 63017 4889446 ~ 4889697 (+)
G128354 NA non-coding downstream 89251 4915680 ~ 4916311 (+)
G128358 NA non-coding downstream 96988 4923417 ~ 4924257 (+)
G128359 NA non-coding downstream 98101 4924530 ~ 4924741 (+)
G128137 NA other upstream 388931 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 488047 4327206 ~ 4332085 (+)
G127979 NA other upstream 1057146 3752551 ~ 3762986 (+)
CI01000026_02659356_02660297 NA other upstream 2159303 2658605 ~ 2660829 (+)
G128585 NA other downstream 1123384 5949813 ~ 5950122 (+)
G128601 NA other downstream 1157450 5983879 ~ 5991761 (+)
G128757 NA other downstream 1499767 6326196 ~ 6326785 (+)
G130552 NA other downstream 2268624 7095053 ~ 7096652 (+)
G130967 NA other downstream 3361945 8188374 ~ 8189073 (+)

Expression


Co-expression Network