G132066


Basic Information

Item Value
gene id G132066
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8664498 ~ 8664886 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150198
GTGCAGTGCTGCCGACGACTTCCGTAAACCCGAACGCGCGTTGATAGGCGTGCTTTTGCTCTCTCGCTCTGGTCGACGTGTGCGCGCGCGCCCTTCCGGGAGAAGTGCCCGTACAAGGAATTCCGCCCCCGTTGACGTCACTCAGGCCGATACTCGAAAAAAAAAAAAATCGAAACCTGTGACAATTTGGAAAAGAATTTTTGGAACAGAAATACTCCGTCATACGTCCAACTCATGTTTTGAAACTTTGGCCATGTTTAGCATGAGAATCCAACTCTTTAACAGTGTAAATAAGTCAGAATACATGACATAGCATTATACCCCCCAATTAACCGGAAATCAAGTTTAACACTGATATGACATCGTTGACAGGCAACGCAATGACACAG

Function

NR:

description
sorcin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150198 True 389 lncRNA 0.47 1 8664498 8664886

Neighbor

gene id symbol gene type direction distance location
CI01000026_08633986_08658997 NA coding downstream 5180 8633554 ~ 8659318 (-)
CI01000026_08620867_08632135 LPCAT2 coding downstream 32363 8620026 ~ 8632135 (-)
CI01000026_08591640_08612056 SLC6A2 coding downstream 52038 8591402 ~ 8612460 (-)
CI01000026_08501499_08526463 SLC12A4 coding downstream 138035 8501499 ~ 8526463 (-)
CI01000026_08396549_08398206 NA coding downstream 266187 8395312 ~ 8398311 (-)
CI01000026_08722735_08726049 IRX6A, IRX6 coding upstream 57253 8722139 ~ 8726194 (-)
CI01000026_08861639_08866198 IRX5A, IRX5 coding upstream 196753 8861639 ~ 8868149 (-)
CI01000026_09147356_09156946 NA coding upstream 482442 9147328 ~ 9158526 (-)
CI01000026_09203430_09218432 FTO coding upstream 538544 9203430 ~ 9218432 (-)
CI01000026_09233035_09245301 FTO coding upstream 567971 9232857 ~ 9245561 (-)
G132065 NA non-coding downstream 1488 8662688 ~ 8663010 (-)
G132064 NA non-coding downstream 2452 8661846 ~ 8662046 (-)
G132053 NA non-coding downstream 80371 8583816 ~ 8584127 (-)
G131809 NA non-coding downstream 251866 8412370 ~ 8412632 (-)
G131808 NA non-coding downstream 253587 8410677 ~ 8410911 (-)
G132076 NA non-coding upstream 28654 8693540 ~ 8693778 (-)
G132091 NA non-coding upstream 62164 8727050 ~ 8727287 (-)
G132092 NA non-coding upstream 62627 8727513 ~ 8727861 (-)
G132093 NA non-coding upstream 68025 8732911 ~ 8733171 (-)
G132094 NA non-coding upstream 71302 8736188 ~ 8736438 (-)
G131742 NA other downstream 356791 8306776 ~ 8307707 (-)
G130256 NA other downstream 2347344 6275511 ~ 6317154 (-)
G129750 NA other downstream 3845216 4785885 ~ 4820249 (-)
G129658 NA other downstream 4291429 4367296 ~ 4373069 (-)
G129476 NA other downstream 4993614 3670574 ~ 3670884 (-)
G132575 NA other upstream 722265 9387151 ~ 9387716 (-)
G132721 NA other upstream 885144 9550030 ~ 9550644 (-)
CI01000026_10347872_10351783 CEBPA other upstream 1683307 10347746 ~ 10351783 (-)
CI01000026_10788054_10788652 CD59 other upstream 2122453 10787339 ~ 10789709 (-)
G133790 NA other upstream 2169129 10834015 ~ 10859589 (-)

Expression


Co-expression Network