Gene
RNA
| Item | Value |
|---|---|
| gene id | G131809 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 8412370 ~ 8412632 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU149919 | False | 263 | lncRNA | 0.41 | 1 | 8412370 | 8412632 |
| TU149920 | True | 241 | lncRNA | 0.41 | 1 | 8412370 | 8412610 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_08396549_08398206 | NA | coding | downstream | 14059 | 8395312 ~ 8398311 (-) |
| CI01000026_08337806_08350476 | HSD11B2 | coding | downstream | 61552 | 8337730 ~ 8350818 (-) |
| CI01000026_08308439_08310023 | NA | coding | downstream | 102347 | 8308281 ~ 8310023 (-) |
| CI01000026_08294878_08297151 | NA | coding | downstream | 114767 | 8294683 ~ 8297603 (-) |
| CI01000026_08254412_08284933 | GALR1B | coding | downstream | 127437 | 8254412 ~ 8284933 (-) |
| CI01000026_08501499_08526463 | SLC12A4 | coding | upstream | 88867 | 8501499 ~ 8526463 (-) |
| CI01000026_08591640_08612056 | SLC6A2 | coding | upstream | 178770 | 8591402 ~ 8612460 (-) |
| CI01000026_08620867_08632135 | LPCAT2 | coding | upstream | 207394 | 8620026 ~ 8632135 (-) |
| CI01000026_08633986_08658997 | NA | coding | upstream | 220922 | 8633554 ~ 8659318 (-) |
| CI01000026_08722735_08726049 | IRX6A, IRX6 | coding | upstream | 309507 | 8722139 ~ 8726194 (-) |
| G131808 | NA | non-coding | downstream | 1459 | 8410677 ~ 8410911 (-) |
| G131805 | NA | non-coding | downstream | 6818 | 8405173 ~ 8405552 (-) |
| G131804 | NA | non-coding | downstream | 8584 | 8403567 ~ 8403786 (-) |
| G131788 | NA | non-coding | downstream | 47493 | 8364525 ~ 8364877 (-) |
| G131787 | NA | non-coding | downstream | 48213 | 8363855 ~ 8364157 (-) |
| G132053 | NA | non-coding | upstream | 171184 | 8583816 ~ 8584127 (-) |
| G132064 | NA | non-coding | upstream | 249214 | 8661846 ~ 8662046 (-) |
| G132065 | NA | non-coding | upstream | 250056 | 8662688 ~ 8663010 (-) |
| G132066 | NA | non-coding | upstream | 251866 | 8664498 ~ 8664886 (-) |
| G132076 | NA | non-coding | upstream | 280908 | 8693540 ~ 8693778 (-) |
| G131742 | NA | other | downstream | 104663 | 8306776 ~ 8307707 (-) |
| G130256 | NA | other | downstream | 2095216 | 6275511 ~ 6317154 (-) |
| G129750 | NA | other | downstream | 3593088 | 4785885 ~ 4820249 (-) |
| G129658 | NA | other | downstream | 4039301 | 4367296 ~ 4373069 (-) |
| G129476 | NA | other | downstream | 4741486 | 3670574 ~ 3670884 (-) |
| G132575 | NA | other | upstream | 974519 | 9387151 ~ 9387716 (-) |
| G132721 | NA | other | upstream | 1137398 | 9550030 ~ 9550644 (-) |
| CI01000026_10347872_10351783 | CEBPA | other | upstream | 1935561 | 10347746 ~ 10351783 (-) |
| CI01000026_10788054_10788652 | CD59 | other | upstream | 2374707 | 10787339 ~ 10789709 (-) |
| G133790 | NA | other | upstream | 2421383 | 10834015 ~ 10859589 (-) |
