G138768


Basic Information

Item Value
gene id G138768
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2618184 ~ 2618438 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157670
TTTCATTTCTGTGTTTTCCTTAAATCCTTTCAAGACTATAGCTTGGACGTTCAATGTCCAACATCGATATCTGTACATTGATACGCTCTAATGACTATCATAGCATTGTGAAAGCCACACAAAAAATAACTATGTGGTTTATAACAGTAAGAGTTCACAAGAACCATCATGCATTGTGATCAGTCAATCTTTTTGAAGCATTGACTCTTTGCACATCACTCATTTCAATTCCCAGCAGCCTCTGTGGAACCAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157670 True 255 lncRNA 0.36 1 2618184 2618438

Neighbor

gene id symbol gene type direction distance location
CI01000027_02530086_02589227 NA coding upstream 28708 2529638 ~ 2589476 (+)
CI01000027_02492454_02508459 NA coding upstream 109582 2492077 ~ 2508602 (+)
CI01000027_02455787_02458435 DCSTAMP coding upstream 159140 2455153 ~ 2459044 (+)
CI01000027_02429134_02451902 RIMS2A, RIMS2 coding upstream 165649 2427563 ~ 2452535 (+)
CI01000027_02419674_02422700 NA coding upstream 195056 2419633 ~ 2423128 (+)
CI01000027_02895512_02924151 NA coding downstream 277074 2895512 ~ 2924197 (+)
CI01000027_02941870_02946290 OXR1 coding downstream 323432 2941870 ~ 2948777 (+)
CI01000027_02981155_02982628 NA coding downstream 362573 2981011 ~ 2982885 (+)
CI01000027_02991231_02994560 PSMA2 coding downstream 372793 2991231 ~ 2994717 (+)
CI01000027_02995394_03005981 ATAD2 coding downstream 376956 2995394 ~ 3005997 (+)
G138767 NA non-coding upstream 405 2617534 ~ 2617779 (+)
G138766 NA non-coding upstream 1885 2616003 ~ 2616299 (+)
G138765 NA non-coding upstream 3455 2614495 ~ 2614729 (+)
G138764 NA non-coding upstream 4655 2613073 ~ 2613529 (+)
G138763 NA non-coding upstream 5362 2612593 ~ 2612822 (+)
G138770 NA non-coding downstream 1080 2619518 ~ 2619726 (+)
G138771 NA non-coding downstream 2932 2621370 ~ 2621593 (+)
CI01000027_02611537_02740618 ZFPM2, ZFPM2A non-coding downstream 10678 2611537 ~ 2740618 (+)
G138655 NA non-coding downstream 65481 2683919 ~ 2694005 (+)
G138658 NA non-coding downstream 77637 2696075 ~ 2703225 (+)
G138515 NA other upstream 941324 1664408 ~ 1676860 (+)
G138436 NA other upstream 1110368 1506961 ~ 1507816 (+)
G138290 NA other upstream 1619003 995970 ~ 999181 (+)
G138247 NA other upstream 1748609 855388 ~ 893121 (+)
G138238 NA other upstream 1786501 829774 ~ 831683 (+)
G138915 NA other downstream 865949 3484387 ~ 3486647 (+)
G138953 NA other downstream 883634 3502072 ~ 3520065 (+)
G140436 NA other downstream 2118960 4737398 ~ 4774262 (+)
G140440 NA other downstream 2161979 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 2430485 5050310 ~ 5055755 (+)

Expression


Co-expression Network