Gene
RNA
| Item | Value |
|---|---|
| gene id | G138658 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 2696075 ~ 2703225 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU157544 | True | 6587 | lncRNA | 0.37 | 2 | 2696075 | 2703225 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_02530086_02589227 | NA | coding | upstream | 106599 | 2529638 ~ 2589476 (+) |
| CI01000027_02492454_02508459 | NA | coding | upstream | 187473 | 2492077 ~ 2508602 (+) |
| CI01000027_02455787_02458435 | DCSTAMP | coding | upstream | 237031 | 2455153 ~ 2459044 (+) |
| CI01000027_02429134_02451902 | RIMS2A, RIMS2 | coding | upstream | 243540 | 2427563 ~ 2452535 (+) |
| CI01000027_02419674_02422700 | NA | coding | upstream | 272947 | 2419633 ~ 2423128 (+) |
| CI01000027_02895512_02924151 | NA | coding | downstream | 192287 | 2895512 ~ 2924197 (+) |
| CI01000027_02941870_02946290 | OXR1 | coding | downstream | 238645 | 2941870 ~ 2948777 (+) |
| CI01000027_02981155_02982628 | NA | coding | downstream | 277786 | 2981011 ~ 2982885 (+) |
| CI01000027_02991231_02994560 | PSMA2 | coding | downstream | 288006 | 2991231 ~ 2994717 (+) |
| CI01000027_02995394_03005981 | ATAD2 | coding | downstream | 292169 | 2995394 ~ 3005997 (+) |
| G138655 | NA | non-coding | upstream | 2070 | 2683919 ~ 2694005 (+) |
| CI01000027_02611537_02740618 | ZFPM2, ZFPM2A | non-coding | upstream | 24949 | 2611537 ~ 2740618 (+) |
| G138771 | NA | non-coding | upstream | 74482 | 2621370 ~ 2621593 (+) |
| G138770 | NA | non-coding | upstream | 76349 | 2619518 ~ 2619726 (+) |
| G138768 | NA | non-coding | upstream | 77637 | 2618184 ~ 2618438 (+) |
| G138661 | NA | non-coding | downstream | 139 | 2703364 ~ 2716558 (+) |
| G138687 | NA | non-coding | downstream | 13589 | 2716814 ~ 2722359 (+) |
| G138775 | NA | non-coding | downstream | 29593 | 2732818 ~ 2733295 (+) |
| G138802 | NA | non-coding | downstream | 260592 | 2963817 ~ 2970808 (+) |
| G138515 | NA | other | upstream | 1019215 | 1664408 ~ 1676860 (+) |
| G138436 | NA | other | upstream | 1188259 | 1506961 ~ 1507816 (+) |
| G138290 | NA | other | upstream | 1696894 | 995970 ~ 999181 (+) |
| G138247 | NA | other | upstream | 1826500 | 855388 ~ 893121 (+) |
| G138238 | NA | other | upstream | 1864392 | 829774 ~ 831683 (+) |
| G138915 | NA | other | downstream | 781162 | 3484387 ~ 3486647 (+) |
| G138953 | NA | other | downstream | 798847 | 3502072 ~ 3520065 (+) |
| G140436 | NA | other | downstream | 2034173 | 4737398 ~ 4774262 (+) |
| G140440 | NA | other | downstream | 2077192 | 4780417 ~ 4785660 (+) |
| CI01000027_05050310_05055447 | NA | other | downstream | 2345698 | 5050310 ~ 5055755 (+) |
