G140262


Basic Information

Item Value
gene id G140262
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3802715 ~ 3805429 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159414
ACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTTATTTTTGGGTGAACTATCCCTTTAAGGTGTGACTCTAAAGTCTCTAATATCCTTCATACAATTCAGAAGAATTTAAGCCATCACACTCTGAACAAACTGAAGAAGTGTCCAGGATGGGTCCTATAAAGAGTGTATTTATATTAATAACAGTCGTTTCCATAGTAGCATTCCATTCCTGTTCCAGTAAAATAAAGGTAACAACACAGATAGAGGCTTCTGTACACAAACACAAAGCCTTATCTGTTCACCAGCATTTGATCAGTCTGATGAGACATTTAAATGGCAGACATATGAGACCTGTTTAGTCAAAGGAGTGCTGATAGTGGCTTTAAGGCATGTGAAATCAATCCTTAATACCAGTTGTTCTTACTAAGGTTGGGTGATGCAGCAAAAAAGTAAAAATATACATATATTAAAAGAATATACTGGATGTTGTCTTGTGATATTCACAATGTTGCTTAATTTTATGTCACCAGAAAAATCATTAGGAATATATTGTGTATATTTAATAAATCACCCAGTCCTACTTGCTACTTGACACTTGTTACATACATGATAGCACTAATGTAGATCAGCTAATTTAAAGATGTTTTAAATATCTTAAAATATATATTCTGGCAACCTTTACCACAAGTTTTCCTGTACGTACTGCATTTGAGTGGTGAGTTCAGTTAGTTTGAACTAAATGTTCAGTGCAAGAAAAGTTCTGAAACCACCTTGAAAAACACCGTACAAATCCATAACAGACAGTCACACTTCAGGACATCGATTAGACAAGCCTGCTGCAAGATGAGAAGATGACGAGTCACAGAAGACAATGGTGTAACAACAAACCCTTTACAAAAAAAAGCACTGTGGCATTATGCAAAGATGTAAACAAATATCCAAGTTTGGGAAGGACCAAATGTAATAATTTAAGAATCACACACTGAAATCCCCATATTGATCAACCACTACAGAAAAGTACAAAAAAGTATAAAAAAAATATACCTGTTGATAGGTAAATAGGGGGGGATGGGGGGGAGTGGGGGGTTTAAGAGCAAGACTCGTTACAAAGCAAATTACTGCCTAATTTCAGTGAACTGGTTCTTTTGTTTTAATGAACCGGTTAAAAAAAGATTCAATCAGATTCGATTACATCATGACGTAATCACTATGTCATTGACAAGCACTCCATGCGTGTTGACAAAGCTGTCATGCAATCAAGTAACAAAAAGCTGATTATCAGTACGTTAAGTTTGTTCATATTTCTGATATATGGCTATTAAAGTTTTGTTTTGGTCCATTAGTTAAACGCTATTTAAACACTCCAAACGCTATTTCTTTCAGCTCAATCATCGATTCTCATTACGAATCAGGCATGTTCAAAAGAAACGGTTCTCAGTTGAATGAATCAAGTAGTTGACTCAAGAACCGCTTGGATTGATTCGGTCGAATTGGTTCGAACAGTTCATTCAAAAAGAACCGACTCAAATGAACGACTAGTTCACGAATCGATTTAGCAAATGTGAAGAGAATGAATGGACGCTTAAACGCTAAATCTAAAATACTAATACCGCGAGCTTCAGTCACTGCGTAAACCAATGCAATTTATATAAAATAAACGCAATTTGCATGCTAAACGTGCACAAAGTAAAACTACAGCACGCGCCAATCTAATCCTCAGTGCTGAACGTGCATTTGGGCACACCGGGACTGATCAAACACAGAATGTCGATGTCATCAGTGCGGTTTGGGGATGCAATCACAGTTGCATGCGTGTAAACGCCTAACCTACTACTGCACAGCGATGCAAGAATAACTGATAAAAGTGAATCGTCAAACAACACTAGCATACGGATTTGTATAAATACAACATTCGCATGCATTGCATAAAACAACTAACCATTTGCTACTTACTCGAACATGTCATTGGGTGTTTTCTCAAATCAATGCGTGCTGCCCACGTTTATTTTACAGTATAGCCTCTCAATATGGCACTGCGCCGACATAACAGACGGTACATTCAGATTAACTAGCCGAATGCATGAAGACACCGCGTCCTCTGTTCATCCGCAGCCCGTTCTAGTCCAACAGAACGCAATCGTTCAATATCCCCATCCTAAACGAGGTACCAGACCCCCTCTAAAACGCAACGACCACAGCGGTCTCCACCATGAGCGCTCCGGTTATCCTAAAGCAACCTACACACTGGACAAGAGGGGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159414 True 2255 lncRNA 0.38 2 3802715 3805429

Neighbor

gene id symbol gene type direction distance location
CI01000027_03787377_03788902 NA coding downstream 12436 3787377 ~ 3790279 (-)
CI01000027_03750919_03761043 FLI1, FLI1B coding downstream 41652 3750830 ~ 3761063 (-)
CI01000027_03694455_03710634 NA coding downstream 91676 3694227 ~ 3711039 (-)
CI01000027_03689861_03690969 NA coding downstream 111504 3689439 ~ 3691211 (-)
CI01000027_03513546_03521352 NA coding downstream 281363 3512392 ~ 3521352 (-)
CI01000027_03832200_03836030 NA coding upstream 25776 3831205 ~ 3836530 (-)
CI01000027_03898513_03905519 NA coding upstream 91837 3897266 ~ 3906494 (-)
CI01000027_03922380_03931033 NA coding upstream 116813 3922242 ~ 3931033 (-)
CI01000027_03969492_03973741 NA coding upstream 163269 3968698 ~ 3974176 (-)
CI01000027_04008272_04011121 NA coding upstream 202751 4008180 ~ 4012622 (-)
G140221 NA non-coding downstream 27635 3774856 ~ 3775080 (-)
G140220 NA non-coding downstream 28165 3773514 ~ 3774550 (-)
G140167 NA non-coding downstream 52676 3746879 ~ 3750039 (-)
G140218 NA non-coding downstream 59321 3743148 ~ 3743394 (-)
G140217 NA non-coding downstream 60704 3741247 ~ 3742011 (-)
G140237 NA non-coding upstream 18475 3823904 ~ 3824438 (-)
G140267 NA non-coding upstream 43931 3849360 ~ 3849642 (-)
G140268 NA non-coding upstream 64038 3869467 ~ 3869871 (-)
G140308 NA non-coding upstream 193259 3998688 ~ 4036880 (-)
G140363 NA non-coding upstream 301474 4106903 ~ 4107518 (-)
G140118 NA other downstream 218036 3509352 ~ 3584679 (-)
CI01000027_02226447_02227499 NA other downstream 1574690 2225781 ~ 2227499 (-)
CI01000027_02119227_02124423 NA other downstream 1676687 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 2482554 1302034 ~ 1321178 (-)
G141481 NA other upstream 566818 4372247 ~ 4412810 (-)
G141488 NA other upstream 702046 4507475 ~ 4508971 (-)
G141728 NA other upstream 1071638 4877067 ~ 4877766 (-)
G141588 NA other upstream 1302906 5108335 ~ 5201155 (-)

Expression


Co-expression Network