CI01000028_00616942_00640490 (FLI1, FLI1A)


Basic Information

Item Value
gene id CI01000028_00616942_00640490
gene name FLI1, FLI1A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 616390 ~ 642176 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_00616942_00640490.mRNA
ACATTTATTGAGTATAAGGTTCAGTGAATGTTAAGAGTTTTATAGGTGATTGTAGTTGATGTAACAGCCAGAAACCTAGGCGACTGATTCAAGATAGTTTTCATAAAACTGAAAGAAAGGTTTGACTGAAATGTGAATGGAGACGATCACATGCACGTGTAGACGCGGCTCTCTCCAGAGGAGCCTGTCTGCTGCGTTTGTTTTCTTTAATAAAACTACATCACCCCAGCTGAGCGCCGGCAATGAGAGCAAATGTAGAAGTGACCTTGCCTCTGTTCTGTCTCACGTATGAGTCATGAACAAGAAATCTTTTACTTATTGAAAGCCACATTTTGAAATTCTTCTCGAACAAAAGGTTTAAAAGTTGATGTTAAGTTTAATGACATTTTAACGATTGTGTTTTGACTAGTGCTGTCAAATCGATTAATCACGATTAATCGCATCTAACATAAAAGTTTGTGTTTAAATAATATAATATATACAGTATATTAGGGATGCACCGATATATTGGCCAATAATTGGTATTGGCCGGTAAAAGCAAATTTTCAAAATAGCTGATAAAATTTAAAAACAGTCGATAGTCAGGTCTGATGTATCCTGTCAATCAAAAGAGGGCAGGAAAATGCACTGAATTTGTGCTTTGTGTAAAGAAAATGCTAAGAAACCAGTTTGATGTTCAGCATTAATAGTAACATTCAGAATTTAGTTAATGTGTGTTAATATTAATTTGAGTAATGTGTTTGTTTATAACTGATATCAGTTATTCTGAAACAAGTTGATGACATGGAGTGAATAAAGTTTTTATTTGCATTTCTTTCAGAATATAATATGTACAAAATATCATGATTAATTATATATATATATATATATATATATATATATATATATATATATATATAAATATAATAAAATATATACACATATTATGTAAAGAGTAAACACAAAATTTATGTTAGATGTGATTAATCTAACAGCACTAGTTTTGACAGTGATAACTGAAGTAAATGGCTGAATTTTATTATTATTATTATTGTTGTTGTTATTAATTTTTTTTTCTATGCCGCCTGATACATAAAACTGTGAAGTCAACATGAAATCAAAATTTTCTACCTTGTTTACGTTCATAATGCTCATTCCTGATCTTAGTGTCCACAATTCATTGGTTCACATTATTGAAAGAAAAATCTCTTATCAAAACACAATAGATTGCTCCGCCTCTAAAACATGACATCACAAATCCCTCTTTTTTAACCCCTCCCCTTCAAACACCTGACTTCATTCTGGTATGTAATTCCTACTTTTCACAATCCCATCAATGCCCAGTGGTCCTTGTCTGCATCCTGTTTCACATTTATGTCAAATAAAGTAAAATAGTTACAAACTGTGTTTAATGCTGTCTTCAAGCCATTTGGTTACATGTAAGCAATCAATTGCACTGCTTCATTTGCACTCAGCATCTGCGGTTCCAATGCCCTTCAGCAAGAAACAATTTAAAAATTTGTGTTGCTTAATTCTGATTACACATGATGAACTGAAAGTCATTTGTCATTTGCTGTGTGCTTTAATGAGAAACAGTGATATAGTTTCCGCCCTACAATCCTCCAGGAGGCGCTGTCAGTGGTGAGTGAAGACCAATCTCTGTTTGAGCCTCCATACGCTGCTGCTGCTCCCTTACCCAAGACGGACATGACTGCGTCCGGCGCACAGGATTACGGTCAGACCCACAAGATCAACCCTATTCCTCCTCAGCAGGAGTGGATCAACCAGCCTGTGCGAGTCAATGTCAAACGAGAATATGATCACATCAATGGATCCAGAGAGTCCCCGGTGGACTGTAGTGTGGGTAAATGCAATAAAATGGTGGGTGGGACCGACACATCTCAGATGAACTATACTGGCTACATGGATGAGAAGTGTGCTCCGCCCCCAAACATGACAACCAATGAGAGGAGAGTCATCGTCCCAGCAGATCATGTGCGGCAATGGTTAGACTGGGCCATTAAAGAGTATGGTCTTCAGGAGATCGACACAGCCATGTTCCACAACACAGATGGAAAAGAGCTTTGCAAGATGAGCAAAGAGGACTTCCTGAGACTTACCAGCGGTTATAACACGGAGGTCCTGCTCTCACATCTCAATTACCTCAGGGAAAAGCATCTCCCCCTGAGAGCTTTCGGCCTCAGACTTAGAGAGATGAAGCCCAGGTGCATGGCCTCAGGAGACTGGCCAGCGAGGCCCTTGCATGCACACTGTTGCACGGGAAAGTTTATCCCTAATTTACAACAGAGGCATCTTGCCCCATTTCTCTTCCAAGGGATTTCTTATGTTATTTCCCTGCATGTTTTGGCAAGAATCCCGTGGCTTTGGCGAAAACTAAGCCCACTCATCCACTTGAATACTTCAGTGCCATCTATAAGCGAAATGTCGGGAGGACAGGCCGCATCTGTGCGTGGATCGTCGCTTTGTTTGCACGAGAACTGTGTCGGCAGCTCATCAATATCATACAACACACCATCTCATACTGACCAGTCTCCTCGCTTGGCTGCCAAAGATGATGCGTCTTATGATGCTGTACGGAGGGCAGGCTGGTCAAACAACATGCACAGCGGCAAAGACCCTTACCAGATATTAGGACCCACTAGCAGTCGACTTGCCAACCCAGGTTCCGGTCAGATCCAGCTGTGGCAGTTCTTGCTAGAGCTTCTCTCTGACAGTGCCAACGCCGGCTGCATCACCTGGGAGGGAACCAACGGCGAGTTCAAGATGACGGACCCCGACGAAGTAGCGCGTCGCTGGGGTGAGCGCAAGAGCAAGCCCAACATGAACTACGACAAACTAAGCCGTGCCCTGCGCTACTACTACGACAAAAACATCATGACCAAAGTGCACGGCAAACGCTACGCCTATAAGTTTGACTTCCACGGCATCGCTCAGGCCTTGCAGCCCCATCCGACCGAGTCCACCATGTACAAGTACCCGACCGACCTGCCGTATGTACCGAGTTACCACGCCCACCAGCAGAAGGTCAACTTCGTTTCGGCCCATCCTCCATCCATGCCCGTCACCTCCTCCAATTTCTTCGGGCCCACCCCCCCATACTGGAGCTCTCCGGCAGCTCCCCGTATGCCAAAACTTGAACTGTACTCGGAGCGAAGACAAACCAGGAAGCTGGAAAGGGAGGGATTTTGGCCGAAAAGTTTGTTTAAAGAAGCAGAAGTTGGAAAAGAAAGAGAAACACTCCTCTATGCTGATGACCAAGACAGTGTTGATGTGAAAGCTTTGTCGAATGGATCGAAACCTGCTTTACATTTCCTGATGCACGATGTCCCGTGTGAATCTCACTGTCCCCTCATTGGCCAGTGTAAATCCACTCGATTTCATCTCAAAACAGCCAAAGTGTTAAATTCACATTAGATGTATTTGCATTCCTACATGTCTTAAAAATCCTAGATTCTTGGATCGCTGAATGTGGGCATCATGCAAAATACCTCTTCGAAACGATATAACAGTTAAAACAGCAGCACGAGACATTGAAACCAGAGATTCGCGAACGCTGTGCGTTTGTCAGACCTATTTGCTAGTATTTTTTTTTTTTTTTTTTTTGATCAAAGGTCAACTAGGCATTAAAAGCATCTTACTGTATAAATTATGCAGAGCTATTTTCATATGTGACAGTGTTAAGAATCATACGTTAATACGAGTTGACCTCGGTCAAAATGCAAACTTTTTTATCAGTTCCTAAAGGTAGTAGTTTGTACTAGGTGTTTTGTATCTGTACATATGGGCAATAAGTTTATGAATGTTTTCTTGTATTTTTCAGAAAATGCATTTTCTAAAGTTCTTGGCGAGTTGCCATGACAATAAGAAAGTTATTTTGATATGTAGTTGATATTTTTTATTCACTAAAAGCAAATGCCTTACCAAACATGCTTGGAGACAATCGGTTTTCTAAAGTGCCATAATAAA

Function

symbol description
fli1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Acts upstream of or within angiogenesis and positive regulation of DNA-binding transcription factor activity. Predicted to be active in nucleus. Is expressed in several structures, including angioblastic mesenchymal cell; cardiovascular system; hematopoietic system; mesoderm; and pharyngeal arch. Human ortholog(s) of this gene implicated in blood platelet disease and thrombocytopenia. Orthologous to human FLI1 (Fli-1 proto-oncogene, ETS transcription factor).

GO:

id name namespace
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
K09436 FLI1; friend leukemia integration 1 transcription factor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_00616942_00640490.mRNA True 3966 mRNA 0.41 10 616390 642176

Neighbor

gene id symbol gene type direction distance location
CI01000028_00563476_00575567 KCNJ5 coding downstream 38025 562111 ~ 578365 (-)
CI01000028_00534236_00534848 NA coding downstream 81542 534207 ~ 534848 (-)
CI01000028_00474810_00475211 NA coding downstream 141179 473609 ~ 475211 (-)
CI01000028_00444425_00447507 NA coding downstream 168883 444425 ~ 447507 (-)
CI01000028_00443151_00444100 BMP16 coding downstream 172290 443131 ~ 444100 (-)
CI01000028_00704858_00705817 NA coding upstream 62594 704770 ~ 706767 (-)
CI01000028_00767836_00797742 NA coding upstream 125503 767679 ~ 799385 (-)
CI01000028_00801939_00810126 SMTLA coding upstream 159147 801323 ~ 810126 (-)
CI01000028_01011845_01028684 NA coding upstream 369432 1011608 ~ 1029605 (-)
CI01000028_01381059_01398155 BARX2 coding upstream 736996 1379172 ~ 1398357 (-)
G145009 NA non-coding downstream 58546 557592 ~ 557844 (-)
G144989 NA non-coding downstream 82190 525846 ~ 534200 (-)
G144965 NA non-coding downstream 94460 491915 ~ 521930 (-)
G144981 NA non-coding downstream 108988 506152 ~ 507402 (-)
G144963 NA non-coding downstream 143972 472107 ~ 472418 (-)
G144988 NA non-coding upstream 22514 664690 ~ 726000 (-)
G144992 NA non-coding upstream 68876 711052 ~ 716647 (-)
G145048 NA non-coding upstream 86094 728270 ~ 728492 (-)
G145108 NA non-coding upstream 195176 837352 ~ 837568 (-)
G145113 NA non-coding upstream 205069 847245 ~ 847492 (-)
G144855 NA other downstream 480514 135392 ~ 137202 (-)
G146190 NA other upstream 1455394 2097570 ~ 2111265 (-)
G146238 NA other upstream 1505202 2147378 ~ 2160038 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other upstream 1799156 2441332 ~ 2445596 (-)
G149329 NA other upstream 6057337 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 6328581 6965064 ~ 6984084 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location