CI01000028_00704858_00705817


Basic Information

Item Value
gene id CI01000028_00704858_00705817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 704770 ~ 706767 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_00704858_00705817.mRNA
AAAGTGAATTCACATACGAGTAGTCAGTCATGCCTGAGCTAAGTTTATGAGCAAGTGGCTTTCAGTATCAGGGAAATGAAGAAAGGAGAGCTCTGCATGCAATTAGCAAGCTAATGGCTAATGGTTTCTGCTATTGTGGATCCAGCCAATGACCAACAGATGCATTCTCAGTAAATGAATTCCCCAAAGACCGCATTGTTTTTATGTATCGCGCCACACATTCCTGCCTTGTTTTACAATCACTAATGTGGATTGGATTTTTGTGTGAGTTTGCTCTGTGACCTAAAAACCAATGTGCCTTTGAGTTCAGCTCTAAATGGACCAATTACACAATTAACTGTATGTAGAGTAAAATACCACAGCTGTAGCAATGAAAAGAGCTCACGAGCCCAAAATAGATGAATGGAAGGCTGGAAAAGAAGATGCAATGTTCTGAAATACACAGAAAACTGCAGAACACAACGGTGTGCTAACGCATCATCAAAGTGACTAAAGTGATGCATCATTTCAGTAAAATGCTCTATGGTAACAAATGTCAACATCAAATGTGTCAGAAAGCAGAAGCGGAGAAACGCAGAGTGACATGCCAAATTAAGTCTCTGCAGTTCTTAACTGTGTAAGAAATAGTTTGAAATGCCTTAAACAGGTTCTATTTGCACACTTTCACAAGTTAAAAAAGTCAGACTAACCCTGCTCTGTAGTTTTATGAGAAAGGGGCGAGTTGTCGGATCCCACCATGTTCAACTGGTGTAAGTGAACAAAGTCAAAGACTAGCCCTTATTATGACTGCCTCTTGGATCCGGTCCAGACACCTACACAGAACGCCTTTAACTGCTCTCATCCCTAAATCGCCCGAGCAGAGCCTCTCTGTCAGAAATATGTAGATAGCGGGGAGAAGGTTGAACGAGAAAGAGTCCCAGCTGTGACGGCTCTTGTGACTGCCAAGGATCATGTGCCTTCTATTCAGCTGTACATCAAGTAGCACTCACAAACTGAGAGAGACTGTAAACCTAGCTGCAGCCAAACACCTGGACCTCAGAGAACAGCTTAAGATCCCATATGTAACTGGACTGACACGTAGCCAGAACCAGTCAGGATGCCGCTCTGATCTCAAAACCAGACCCAACGCCACCCTCCGTGTCTCTCCGTTGTACTCGGTAGACATCTGCAAAACAGCCACAGCACAAAAACAAGAGTGGCATGGAAAGGCAGGCACCGGTCCGGCTGGCTTACTCACCTCAAGGGCCTCCCACCACCCAGGAGGCGGTCTGGAGCCCACCAGAGAGCCTCAGAGTGACTGGGAAGGGCTAATGTCTTATGGGAGGAGGGTTCAGAGAAGCAGGGCCAGAGATAACTGTTGGGAAGACTTCAAACTGAACACAGTGAAGTGGGTCAGGACGTTTTTTGCAAGTATGCTATGGCTCTGACGTATCGTTCAGTCACTGTGACGCACGTAACGGTTCAGAAAGAGCTTGTTTGTGCTGTCACCTTGTACCAATAACTTGAACGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_00704858_00705817.mRNA True 1515 mRNA 0.45 3 704770 706767

Neighbor

gene id symbol gene type direction distance location
CI01000028_00616942_00640490 FLI1, FLI1A coding downstream 62594 616390 ~ 642176 (-)
CI01000028_00563476_00575567 KCNJ5 coding downstream 126405 562111 ~ 578365 (-)
CI01000028_00534236_00534848 NA coding downstream 169922 534207 ~ 534848 (-)
CI01000028_00474810_00475211 NA coding downstream 229559 473609 ~ 475211 (-)
CI01000028_00444425_00447507 NA coding downstream 257263 444425 ~ 447507 (-)
CI01000028_00767836_00797742 NA coding upstream 60912 767679 ~ 799385 (-)
CI01000028_00801939_00810126 SMTLA coding upstream 94556 801323 ~ 810126 (-)
CI01000028_01011845_01028684 NA coding upstream 304841 1011608 ~ 1029605 (-)
CI01000028_01381059_01398155 BARX2 coding upstream 672405 1379172 ~ 1398357 (-)
CI01000028_01403859_01408636 NA coding upstream 696939 1403706 ~ 1408680 (-)
G145009 NA non-coding downstream 146926 557592 ~ 557844 (-)
G144989 NA non-coding downstream 170570 525846 ~ 534200 (-)
G144965 NA non-coding downstream 182840 491915 ~ 521930 (-)
G144981 NA non-coding downstream 197368 506152 ~ 507402 (-)
G144963 NA non-coding downstream 232352 472107 ~ 472418 (-)
G144992 NA non-coding upstream 4285 711052 ~ 716647 (-)
G145048 NA non-coding upstream 21503 728270 ~ 728492 (-)
G145108 NA non-coding upstream 130585 837352 ~ 837568 (-)
G145113 NA non-coding upstream 140478 847245 ~ 847492 (-)
G145141 NA non-coding upstream 227709 934476 ~ 934739 (-)
G144855 NA other downstream 568894 135392 ~ 137202 (-)
G146190 NA other upstream 1390803 2097570 ~ 2111265 (-)
G146238 NA other upstream 1440611 2147378 ~ 2160038 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other upstream 1734565 2441332 ~ 2445596 (-)
G149329 NA other upstream 5992746 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 6263990 6965064 ~ 6984084 (-)

Expression


Co-expression Network