Gene
RNA
| Item | Value |
|---|---|
| gene id | G145009 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000028 |
| NCBI id | null |
| chromosome length | 9874160 |
| location | 557592 ~ 557844 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: CTD nuclear envelope phosphatase 1A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU164771 | True | 253 | lncRNA | 0.38 | 1 | 557592 | 557844 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000028_00534236_00534848 | NA | coding | downstream | 22744 | 534207 ~ 534848 (-) |
| CI01000028_00474810_00475211 | NA | coding | downstream | 82381 | 473609 ~ 475211 (-) |
| CI01000028_00444425_00447507 | NA | coding | downstream | 110085 | 444425 ~ 447507 (-) |
| CI01000028_00443151_00444100 | BMP16 | coding | downstream | 113492 | 443131 ~ 444100 (-) |
| CI01000028_00363732_00407780 | PPP1R37 | coding | downstream | 149416 | 363106 ~ 408176 (-) |
| CI01000028_00563476_00575567 | KCNJ5 | coding | upstream | 4267 | 562111 ~ 578365 (-) |
| CI01000028_00616942_00640490 | FLI1, FLI1A | coding | upstream | 58546 | 616390 ~ 642176 (-) |
| CI01000028_00704858_00705817 | NA | coding | upstream | 146926 | 704770 ~ 706767 (-) |
| CI01000028_00767836_00797742 | NA | coding | upstream | 209835 | 767679 ~ 799385 (-) |
| CI01000028_00801939_00810126 | SMTLA | coding | upstream | 243479 | 801323 ~ 810126 (-) |
| G144989 | NA | non-coding | downstream | 23392 | 525846 ~ 534200 (-) |
| G144965 | NA | non-coding | downstream | 35662 | 491915 ~ 521930 (-) |
| G144981 | NA | non-coding | downstream | 50190 | 506152 ~ 507402 (-) |
| G144963 | NA | non-coding | downstream | 85174 | 472107 ~ 472418 (-) |
| G144962 | NA | non-coding | downstream | 86738 | 470644 ~ 470854 (-) |
| G144988 | NA | non-coding | upstream | 106846 | 664690 ~ 726000 (-) |
| G144992 | NA | non-coding | upstream | 153208 | 711052 ~ 716647 (-) |
| G145048 | NA | non-coding | upstream | 170426 | 728270 ~ 728492 (-) |
| G145108 | NA | non-coding | upstream | 279508 | 837352 ~ 837568 (-) |
| G145113 | NA | non-coding | upstream | 289401 | 847245 ~ 847492 (-) |
| G144855 | NA | other | downstream | 421716 | 135392 ~ 137202 (-) |
| G146190 | NA | other | upstream | 1539726 | 2097570 ~ 2111265 (-) |
| G146238 | NA | other | upstream | 1589534 | 2147378 ~ 2160038 (-) |
| CI01000028_02441408_02445596 | RPL35A, GM10247 | other | upstream | 1883488 | 2441332 ~ 2445596 (-) |
| G149329 | NA | other | upstream | 6141669 | 6699513 ~ 6701240 (-) |
| CI01000028_06969947_06983352 | NA | other | upstream | 6412913 | 6965064 ~ 6984084 (-) |
