CI01000028_00767836_00797742


Basic Information

Item Value
gene id CI01000028_00767836_00797742
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 767679 ~ 799385 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_00767836_00797742.mRNA
AGTCTTGTGCAGACCCAGTCCCAGTACTCAAGAATAAGTTCCAAGAGTCATTAATATTCATATTAGATTTATAAAGTCAGCTAAACTGCAAATGTGTTGTGTTGTCCAGCAAAGTATTTCAAGTTTCAAGGCCAAGGATTTTATTTTTCTTCTTCATGCATTATTCTAGACCCAAGTGCATAAATTGAATTGAATTTAACCCACACCATTAGGTGGCACTAGACCTCTATAGTACAGAAAATACAGTCAGGAAAAGTGGGGGCACTTTTTTTTTTTTTCCGTGAAAATATTCACACCCAAATTCTCCAAAGGCAGAAAATATGTCAGTGATATATAAGAATGCTGAAGAGTAATGGATCAGAACAACGTTCGTCACCTTTAAACTTGATCTTGTGTTGTTTGTAAAGATCAGTGATGTCCCACAAAACTCTAATCAGCAGCTGTGGTTGGTGGACACGTGGTAATGTCAATAACCTATTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTACTTACTTACTTACTTACTTACTTACTTACTTACTTATTTGTTTAATTTCTACAAAGACTTTAGATGCACTATTTACCATCAAACAAACATTAGCCATTCTGGTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTATTTATGTATTTATTTTATCATTTGTTTGTTTGTTTGTTTGTTTATTTTCTACAAAGACTTTAGATGCACTATTTACCATGAAACGAACATTAGCCATTCTAGTGTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATGCGTAGGTTTCTTTATTTATTAATTCATTCATTCATTCATTCATTCATTCATTCATTTATGTATTTATTTATTTATTTATTTTCTACAAAGACTTTAGATGCACTATTTACCATGAAACGAACATTAGCTATTCTAGTGTTTATTTTATTTTATTTTATTTTATTTTATTTTTATGCGTAGGTTTCTTTATTTATTAATTCATTCATTCATTCATTCATTCATTCATTCATTCATTTATGTATTTATTTATTTATTTATTTTCTACAAAGACTTTAGATGCACTATTTACAGTGAAACGAACATTGGCCATTCTAGTGTTCATTTTATTTTATTTTATTTTATTTTATTTTTTGGGGGAGGGGGCATTTCTGGTTCACTTGGTGGCCAATGAGAAAAAAGACATGATGAAAATAAAATGTAAGATGTGTTAGGTTCCATACAGTATTCATATAAAGTCAGCTAAACTGCAAATGTGTTGTGTATATATATATATATATATATATATATATATATTGTTATATATATGACCATATTCTGGTCATATTGATTCTGCTAGTGTTTAATTTTCCACACCCACCACCATCTCCATGTCCAAGTTCCTCTTATCAGAAGGTGTAAATCACCGTCTGGCTGTCATGACGAAGGGTGCTCCGGCATAGTGAGGGTCTTGTGGGCAGGATGTGGCGGTGAGGCCTGGTGTCAGCAGTGTCAGGTTCAGCTTCCTGTGTCCTAATCATTTCAACATGGAGGCCCATGCCTGGGCTCTGGCTGCTAAACCGCCAACCTGGGCCTCACTCCGCCAGCACTGCAAAGAAAGCAGCAGTGTGGACCTCCACCCCTCAGCCCCCTTCCGCTCCCTCGGCTGTACAACCATAAATATTAAAGATCTGCTATATGAGAGCGGTGTAAAGTTTAGGGAGTTGGGGGGCGGCGGAAATGGGGCCATCAGCCAGCAGAGATCAGGCACAGGGTGCTTCGCTGGAGGCCAGTTAGGGAAGACCTCATCAATCCCGTCTGGCAATCGTACAACATTCCCACGCCACCGCCGGCAAAGGCCATCGCTGGTCCTCCCATGCAAGACGACTTATCAGGGCCATGCAGCAGGGAAACAGGAAGGGAGGAGATCCAGAGACGTGGAGCCTTCAACATGGTGGTCTGCTCCCTCACAGCAGGAGGGTTGGGGGTCTCTGAATGTGCATTCACAGGTCTGGCCCCTCTCTGTGATGAATGAGAGAAACCTGGGGAATGACGTTGGGTTTGGTTTGTTTGGTTGTTGGGTTCTCTCTGTGTCGCTCCATTATGAGCCAGCCAAAACAACTCCTGAAAGCAAAAAGTTCCCCAGGAAATTGCCTAATAACAATAAAGAATCCAGGGGCAAATGGAGTCCATGCTGTTACGGAGGCCGTTCCAGAGGAGCTCCAAAGAGGAGGACCGGAGGAGCTCTCCAATGGGAGAAAATCTGGGACACTTGGAACCAATTAAAAGCACCAAGGCTTGCCAGCAGCTCCTATGCTTTCTTATTCCCCCCCTCTTCCCCTCCTCTTCACTTTCTCTCCCTTTTCATCTCTTTTTCTTCACTTGGCTATGTGTACAGGAAAGCTTCCTTCCACATGCTATTTGTGGATCCAAAAGATCTGGGTACAGGCAAGCTGGAGAGGATGAAGGCTTTGTGGATTATGAATGAGGCTGTCTGCTTTCCCCCAGCTGTTCTCCATTACAGAGCCATCGTGTGTGTGATACGAGCCAGAGCTCAGCCAAAGCTTAAGCCCTGCCAGGTAGCGGTGATGAGACCCAGGGTTCAGGTGCGTGTGAGTAAAGTCAAGAGCTGTAACCATTACTTTCCTGGCACTGAGCCAATGATGAAAACAGGAGATTTGACTTCTCTAAACTGTTTGGGCCAGTTTTATGAAACTGTGTAAATCAGTGAGGATAGAGACAGAACAAATGAGAAATTGAGGACGGGGGAGAAAGAGACAGAGGTGGAAGGTCACTACCATGTTTTTTCTACTTCTACAGTCGAGACGACTTGAATGAGCAATCATTTTGTTTTAAAATGAACAGATGTTCAATAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_00767836_00797742.mRNA True 2976 mRNA 0.38 6 767679 799385

Neighbor

gene id symbol gene type direction distance location
CI01000028_00704858_00705817 NA coding downstream 60912 704770 ~ 706767 (-)
CI01000028_00616942_00640490 FLI1, FLI1A coding downstream 125503 616390 ~ 642176 (-)
CI01000028_00563476_00575567 KCNJ5 coding downstream 189314 562111 ~ 578365 (-)
CI01000028_00534236_00534848 NA coding downstream 232831 534207 ~ 534848 (-)
CI01000028_00474810_00475211 NA coding downstream 292468 473609 ~ 475211 (-)
CI01000028_00801939_00810126 SMTLA coding upstream 1938 801323 ~ 810126 (-)
CI01000028_01011845_01028684 NA coding upstream 212223 1011608 ~ 1029605 (-)
CI01000028_01381059_01398155 BARX2 coding upstream 579787 1379172 ~ 1398357 (-)
CI01000028_01403859_01408636 NA coding upstream 604321 1403706 ~ 1408680 (-)
CI01000028_01582515_01591864 NA coding upstream 782644 1582029 ~ 1592168 (-)
G145048 NA non-coding downstream 39187 728270 ~ 728492 (-)
G144988 NA non-coding downstream 41679 664690 ~ 726000 (-)
G144992 NA non-coding downstream 51032 711052 ~ 716647 (-)
G145009 NA non-coding downstream 209835 557592 ~ 557844 (-)
G144989 NA non-coding downstream 233479 525846 ~ 534200 (-)
G145108 NA non-coding upstream 37967 837352 ~ 837568 (-)
G145113 NA non-coding upstream 47860 847245 ~ 847492 (-)
G145141 NA non-coding upstream 135091 934476 ~ 934739 (-)
G145152 NA non-coding upstream 162731 962116 ~ 962531 (-)
G145155 NA non-coding upstream 173561 972946 ~ 1057319 (-)
G144855 NA other downstream 631803 135392 ~ 137202 (-)
G146190 NA other upstream 1298185 2097570 ~ 2111265 (-)
G146238 NA other upstream 1347993 2147378 ~ 2160038 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other upstream 1641947 2441332 ~ 2445596 (-)
G149329 NA other upstream 5900128 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 6171372 6965064 ~ 6984084 (-)

Expression


Co-expression Network