CI01000028_06681287_06690095 (ACADL.L, ACADL)


Basic Information

Item Value
gene id CI01000028_06681287_06690095
gene name ACADL.L, ACADL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 6681168 ~ 6690168 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_06681287_06690095.mRNA
AATATGTAATATATTTCTAATATTTAAAGAACTATAGCCTGGTCTATTTTAAGGTGTTAATTTGATTCCCAGAATGCAGCATACGGAGATCCAGCATGGGGAAACAGCAGCTCCTTTTCGACCTGAAACACCCATGGCCAAAACGCTGATGGACATAGGCACCAGACGGATCTTCTCAGAGGAACACGACCTGTTCCGTCAGAATGTGCGGCGGTTCTTTCAAGAGGAAGTTGTTCCATATCACACTCAGTGGGAGAAGGCTGGTGAGGTCAGCAGAGAGGTTTGGGAAAAGGCTGGAGAACACGGATTGCTGGGAATATTTACACCTGAGGAGCATGGAGGAATCGGAGGAGACCTCCTGTCTGCTGCTATCGTGTGGGAGGAGCAAATGTACTGTAACTGCAGTGGTCCTGGGTTCTCTCTTCACTCTGAGATTGTAATGCCTTATATCAGTCACTATGGCTCTAAGGCTCAGATCGAGCACTATATTCCACAGATGACTGCTGGGAAATGCATCGGGGCCATCGCTATGACGGAACCTGCAGCTGGCAGTGACCTTCAAGGAGTGAAGACGTATGCGAAAAAAGATGGAACTGACTGGATTCTCAATGGAAGCAAGGTGTTCATCACAAACGGTTGGATGAGTGATGTAGTGATTGTAGTAGCCGTGACTAACCGTGAAGCGAAGACAGCAGCTCATGGAATCAGTCTGTTTCTGGTTGATGCCGGCACTAAGGGCTTCCAAAAGGGCCGAAAGCTGGAGAAAATCGGACTTAAAGCTCAGGATACAGCTGAGCTGTTTTTTGAGGACGTGCGTTTGCCCGCTGAAGCTTTGTTGGGTCAGGTCAATAAAGGATTTTATTATCTGATGAACGAGCTGCCACAGGAACGCCTTATTATAGCAGTCATGGGCCTGGCCAGCTGTGAGTTCATGTTTGAAGAGACAAGGAACTATGTGATGCAGCGGAAGGCATTTGGCAGGACCATCGCTGACCTGCAGGTGGTTCAGCACAAACTGGCTGAGTTGAAGACGGACATCTGTGTCGGTCGAGCTTTCGTTGATAGCTGCCTTCAGCTCCACAGTGAGAAGAAGCTGGACTCAAACACAGCATCTATGGCCAAATACTGGGCTTCAGATTTGCAGAATAGAGTTGCCACTCAGTGCCTGCAGCTTCACGGAGGATGGGGCTACATGTGGGAGTATCCGATAGCCAAGTGAGTGACAGTCACTAAGTAACATCAGCGTTGTCTACTTTGGCCTTGTAACCAGAATGCAGTGTTTGTTCTGTTACAGTGATTGCACACAGTGGTTGAAGGGATAGTTCACCCACAAATAAA

Function

symbol description
acadl Predicted to enable flavin adenine dinucleotide binding activity; long-chain-acyl-CoA dehydrogenase activity; and palmitoyl-CoA oxidase activity. Predicted to be involved in carnitine metabolic process, CoA-linked; fatty acid beta-oxidation using acyl-CoA dehydrogenase; and long-chain fatty acid catabolic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Is expressed in female organism. Orthologous to human ACADL (acyl-CoA dehydrogenase long chain).

GO:

id name namespace
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K00255 ACADL; long-chain-acyl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_06681287_06690095.mRNA True 1338 mRNA 0.48 9 6681168 6690168

Neighbor

gene id symbol gene type direction distance location
CI01000028_06565728_06571617 GLDN coding downstream 109146 6564707 ~ 6572022 (-)
CI01000028_06199637_06208451 NA coding downstream 472175 6198701 ~ 6208993 (-)
CI01000028_06092667_06094044 NA coding downstream 586573 6092188 ~ 6094595 (-)
CI01000028_06079297_06089526 SEMA6D, SEMA6DL coding downstream 591482 6079192 ~ 6089686 (-)
CI01000028_06025232_06034863 NA coding downstream 646273 6024412 ~ 6034895 (-)
CI01000028_06736522_06738241 LYSMD2 coding upstream 46312 6736480 ~ 6738241 (-)
CI01000028_06756364_06785862 TMOD3, TMOD2 coding upstream 66175 6756343 ~ 6788590 (-)
CI01000028_06930121_06933901 BCL2L10 coding upstream 239655 6929823 ~ 6934781 (-)
CI01000028_06937034_06956621 GNB5B coding upstream 246650 6936818 ~ 6956621 (-)
CI01000028_06969947_06983352 NA coding upstream 278181 6965064 ~ 6984084 (-)
G149405 NA non-coding downstream 21431 6659058 ~ 6659737 (-)
G149384 NA non-coding downstream 76983 6603966 ~ 6604185 (-)
G149342 NA non-coding downstream 117135 6563385 ~ 6564033 (-)
G149338 NA non-coding downstream 148255 6531184 ~ 6532913 (-)
G148768 NA non-coding downstream 274911 6406017 ~ 6406257 (-)
G149411 NA non-coding upstream 1229 6691397 ~ 6691607 (-)
G149414 NA non-coding upstream 4717 6694885 ~ 6695129 (-)
G149415 NA non-coding upstream 5672 6695840 ~ 6696043 (-)
G149426 NA non-coding upstream 35864 6726032 ~ 6726294 (-)
G149428 NA non-coding upstream 38080 6728248 ~ 6728482 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4234855 2441332 ~ 2445596 (-)
G146238 NA other downstream 4521130 2147378 ~ 2160038 (-)
G146190 NA other downstream 4569903 2097570 ~ 2111265 (-)
CI01000028_00474810_00475211 NA other downstream 6205822 473609 ~ 475211 (-)
G144855 NA other downstream 6545292 135392 ~ 137202 (-)
G149329 NA other upstream 9345 6699513 ~ 6701240 (-)
G149474 NA other upstream 539623 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 835794 7525962 ~ 7535743 (-)
G149923 NA other upstream 1284400 7974568 ~ 8024244 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012983 acadl coding NC_007129.7 CM002902.2 39487486 ~ 39505847 (+)