G149338


Basic Information

Item Value
gene id G149338
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 6531184 ~ 6532913 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU169629
GTTGCAGATGTGGTGAACGGCCTCAATCTCTTTCTCAAGCCAGTTGTAGAGCTGAAATCGCAGTTTACCACCATCCACCTCATATCCTGTCGCCAGTGTCCGCAGCTCTGTCATGAGAATCTTCAAACAGGCCCGGAACTTGAGCTGTTCGGCGATCACGTCCACCTCCGACTCGCACGCAGAGTCTTCACGCTGCAGGGCTGCTGATTTGGATGGCTTTTTGGAGTCTTCATCCTCCACTTCCGGCTTTTTCATGGTCAGCCCGCCCTCTTCATCCTCATCTTCCTCCTTATCATCTCCCCAGTCCAACTGTAGATTCTCATCTTCCAATTTAACCAATGGTTGACTCCAGTCCAGGCTGGTGGAGGAGTCGGCTCCCCAGGTCTGGCTGGGGATGGCAGGAGCTCCCCAGTCAAGTTCTGAAGCCTTTCCTCCATTCTGCTGTGGTTGGCCAGCATTGATGTTGGCCACAGATGAGCCCTTACTCAAAGAAGATGCTTTCTTAGTGACTTTGGGGATTTTGGATAAGACCTCAAGGGCCAGGAGTGGGCAGCCCACCTTAAAGTGAGCATTAGCGGTGGTGAAGAAGAGCTTTCGCTCTATCAGATTGATTTCGTCTGCACTGTTGCGCTCTGTTAGACCAACTGCAGCCACAAACCCCTCGGGGTTGGCGAAGTGCCGGCGAATGATCAGAGGGTGTGTGCGCAAGTAGTTATAGAAACTAAAGACGACAGGATTGCACGACTTCACCAGCACATCAGGGTTCTCATCATCCTTTTTGTAAATCTGCTCCAGCAGTGTGTCCAGGGCTCTGGTGTAGTCCTTCATGATCCAGTACGCAATGCTCCTCAGGAATGGGTCAGGGTGCAGTTTGGTACAAGAGAACCCGCTTCCATCTCTGTTGCAGCCAAGAACCTTCTCGTAAAGGATACCCTGACAGGTGGATGAACTCTCGTAATCAGCCTCGTAAAGACGAGCAACAATCATCGCAAGCTGGATGTCCTCCATTTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169629 True 1014 lncRNA 0.52 2 6531184 6532913

Neighbor

gene id symbol gene type direction distance location
CI01000028_06199637_06208451 NA coding downstream 322191 6198701 ~ 6208993 (-)
CI01000028_06092667_06094044 NA coding downstream 436589 6092188 ~ 6094595 (-)
CI01000028_06079297_06089526 SEMA6D, SEMA6DL coding downstream 441498 6079192 ~ 6089686 (-)
CI01000028_06025232_06034863 NA coding downstream 496289 6024412 ~ 6034895 (-)
CI01000028_05991041_05996372 NA coding downstream 534812 5990915 ~ 5996372 (-)
CI01000028_06565728_06571617 GLDN coding upstream 31794 6564707 ~ 6572022 (-)
CI01000028_06681287_06690095 ACADL.L, ACADL coding upstream 148255 6681168 ~ 6690168 (-)
CI01000028_06736522_06738241 LYSMD2 coding upstream 203567 6736480 ~ 6738241 (-)
CI01000028_06756364_06785862 TMOD3, TMOD2 coding upstream 223430 6756343 ~ 6788590 (-)
CI01000028_06930121_06933901 BCL2L10 coding upstream 396910 6929823 ~ 6934781 (-)
G148768 NA non-coding downstream 124927 6406017 ~ 6406257 (-)
G148766 NA non-coding downstream 126339 6404624 ~ 6404845 (-)
G148748 NA non-coding downstream 154484 6376359 ~ 6376700 (-)
G148723 NA non-coding downstream 192766 6338188 ~ 6338418 (-)
G148674 NA non-coding downstream 243360 6287611 ~ 6287824 (-)
G149342 NA non-coding upstream 30472 6563385 ~ 6564033 (-)
G149384 NA non-coding upstream 71053 6603966 ~ 6604185 (-)
G149405 NA non-coding upstream 126145 6659058 ~ 6659737 (-)
G149411 NA non-coding upstream 158484 6691397 ~ 6691607 (-)
G149414 NA non-coding upstream 161972 6694885 ~ 6695129 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4084871 2441332 ~ 2445596 (-)
G146238 NA other downstream 4371146 2147378 ~ 2160038 (-)
G146190 NA other downstream 4419919 2097570 ~ 2111265 (-)
CI01000028_00474810_00475211 NA other downstream 6055838 473609 ~ 475211 (-)
G144855 NA other downstream 6395308 135392 ~ 137202 (-)
G149329 NA other upstream 166600 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 437844 6965064 ~ 6984084 (-)
G149474 NA other upstream 696878 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 993049 7525962 ~ 7535743 (-)
G149923 NA other upstream 1441655 7974568 ~ 8024244 (-)

Expression


Co-expression Network