Gene
RNA
| Item | Value |
|---|---|
| gene id | G149342 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000028 |
| NCBI id | null |
| chromosome length | 9874160 |
| location | 6563385 ~ 6564033 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU169633 | True | 649 | lncRNA | 0.32 | 1 | 6563385 | 6564033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000028_06199637_06208451 | NA | coding | downstream | 354392 | 6198701 ~ 6208993 (-) |
| CI01000028_06092667_06094044 | NA | coding | downstream | 468790 | 6092188 ~ 6094595 (-) |
| CI01000028_06079297_06089526 | SEMA6D, SEMA6DL | coding | downstream | 473699 | 6079192 ~ 6089686 (-) |
| CI01000028_06025232_06034863 | NA | coding | downstream | 528490 | 6024412 ~ 6034895 (-) |
| CI01000028_05991041_05996372 | NA | coding | downstream | 567013 | 5990915 ~ 5996372 (-) |
| CI01000028_06565728_06571617 | GLDN | coding | upstream | 674 | 6564707 ~ 6572022 (-) |
| CI01000028_06681287_06690095 | ACADL.L, ACADL | coding | upstream | 117135 | 6681168 ~ 6690168 (-) |
| CI01000028_06736522_06738241 | LYSMD2 | coding | upstream | 172447 | 6736480 ~ 6738241 (-) |
| CI01000028_06756364_06785862 | TMOD3, TMOD2 | coding | upstream | 192310 | 6756343 ~ 6788590 (-) |
| CI01000028_06930121_06933901 | BCL2L10 | coding | upstream | 365790 | 6929823 ~ 6934781 (-) |
| G149338 | NA | non-coding | downstream | 30472 | 6531184 ~ 6532913 (-) |
| G148768 | NA | non-coding | downstream | 157128 | 6406017 ~ 6406257 (-) |
| G148766 | NA | non-coding | downstream | 158540 | 6404624 ~ 6404845 (-) |
| G148748 | NA | non-coding | downstream | 186685 | 6376359 ~ 6376700 (-) |
| G148723 | NA | non-coding | downstream | 224967 | 6338188 ~ 6338418 (-) |
| G149384 | NA | non-coding | upstream | 39933 | 6603966 ~ 6604185 (-) |
| G149405 | NA | non-coding | upstream | 95025 | 6659058 ~ 6659737 (-) |
| G149411 | NA | non-coding | upstream | 127364 | 6691397 ~ 6691607 (-) |
| G149414 | NA | non-coding | upstream | 130852 | 6694885 ~ 6695129 (-) |
| G149415 | NA | non-coding | upstream | 131807 | 6695840 ~ 6696043 (-) |
| CI01000028_02441408_02445596 | RPL35A, GM10247 | other | downstream | 4117072 | 2441332 ~ 2445596 (-) |
| G146238 | NA | other | downstream | 4403347 | 2147378 ~ 2160038 (-) |
| G146190 | NA | other | downstream | 4452120 | 2097570 ~ 2111265 (-) |
| CI01000028_00474810_00475211 | NA | other | downstream | 6088039 | 473609 ~ 475211 (-) |
| G144855 | NA | other | downstream | 6427509 | 135392 ~ 137202 (-) |
| G149329 | NA | other | upstream | 135480 | 6699513 ~ 6701240 (-) |
| CI01000028_06969947_06983352 | NA | other | upstream | 406724 | 6965064 ~ 6984084 (-) |
| G149474 | NA | other | upstream | 665758 | 7229791 ~ 7232783 (-) |
| CI01000028_07527725_07535631 | ARPP19 | other | upstream | 961929 | 7525962 ~ 7535743 (-) |
| G149923 | NA | other | upstream | 1410535 | 7974568 ~ 8024244 (-) |
