XLOC_000867 (si:ch73-236c18.9)


Basic Information

Item Value
gene id XLOC_000867
gene name si:ch73-236c18.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58608978 ~ 58613487 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001367
ACTGTAGGGGGCGCTGTGGGGATTTTCTTCTACTGGACCGCCAAACCACTGAAGGAAGAAACGCTGGAACCCACGATGGAAACCTTGATGTTGAGCATGGAGGTGCAGGTGGACGTGAGCTGCTGTAAATCAGTAGGAACTGATCTGTCCATGCTGGATATTGAGGATTTCATCAGTCAAATCTGTCAGCTGAAGAAAGAGGTGGCGTCGCTGGAGGCCAAgctgagagaaagaggagagaaaCTCCAGCCAGAGCGGCAGGATTCGCTGTGCGGCGTCAGAGCTCAGAGATCCAGAGACACGCAGAACTCAGAGCTCAGCCTGACTTTACTCTGTTATACTGACGCTCAGGATCATCAGAGCTCTGAGCCAGACGCTGGAGAACAGCAGACCACACTGAAGATGTGCTCCGTCAGACTGGAGGACTGCAGGAACCTGATCCAGAGCACAGAAAACACCACAGAAGAAGAGGATCAGAGAGACCCAGAGGATGATGATAGTGATTTTGATGAAGATGGGAAAGATGATGATGgaaatgaggatgatgatgatggaaaagatgatgatgaaaatgaggatgatgatgatggaaaAGATGATGAGGAAGATGTGGTCGATGATGATTTTATTCCTGCAGATACTAACAGTGGATCATCTGATGAAGAAGGAGCTCCGATATTAAAAGATAAGCCGAAAAACAAAAAATTCTCCTGCGCCACCTGTGGAAAACCATACGCCTCACGAAGAGATTTAGAGGTGCATGAAAAAAAGCACTCAGAAACGAAGGTCTTCATCTGCTGGAGATGTCATAGGTGCTTTCCCACGTTAGAGGAGAAGAAACTTCATTCCAAAGAGCATGTGGTAAAGAAAAGGTTTCAGTGTGAACAGTGCGGTAAGAACTTTGTAACTCCTTCTAGTTTAGCTATTCACATAACGACACACACGGGTGACCAGCGTGTCCAGTGTGACGTATGCAACAAATCATTCAGCACCAAAGCAAACCTGGAGGTTCATAAGAGAATCCACACGGGCGAGCGGCCGTATAAATGCCCTCACTGCGAGAAGAGCTTTTGCCACGGATCTCAATTAAAGAACCACGTCCGCATTCACACCAAGGAGAAGCCGTACCAGTGCAGCGAGTGCGGAAAAACCTTCGCAAAATCGGGCACTCTAAACTCGCATCTAAATATCCACTCTGAGGACAGGAGGTATCAGTGCAAATACTGCGACAAGCGATTCCGGTATAAACCGAGTCTGTTTACTCATGAGAAGGCTCACAGTGGAAAGAAGCAACACCTGTGCGCTGAATGTGGGATGAGTTTTATGACTACAAAACAACTTACTTATCACCAGAGAacccacactggagaaaaaccgtacCTGTGCAACATCTGTGGCCGGGGTTTCAGTCAACCAGGCATCTTAATAAACCAcatgaggactcacactggagaaagaccctataagtgttcacactgcgacaagacgTTTGCACGATCTGATGTGATGAAGACCCACGAGAGGGTTcataccggagagaaaccgtaccgCTGCTCCATCTGCGGAGAGAGGTTTGCGTATTTAGGAAGTTTTCAGAGCCACCAGAAGAAACATGGAGGAGAACTAGTGGATGAGCAGATCAGCGCATGATGGAGAATTGACGACTGAGTGTTTCTGACAGCATTTCTTCATCCTAGTCCTCACTCTCCACTGCTCTGCGTATTTTGATCTTTTAAAAAAGAAGACAGCATTTACTTCTATAGTAAGggtcacccctgataaataaagggactaaactgaagaaaaatcaataaatttttattacaGCGGTGGTTCAATCTGTTTGACATCGTCATTTGAGCAGCCAGTAAATACACATTCATGCACCATCAAAGTATTGTAGAGTGCGACATTTTGCCATGTTAAAGTAAGGttcaaaaataaaagtgttgcCTCGTTCAAATAAAGAttttgaaatgaaagtgtcattAGTCAAACAATTATATGTTCTATGATTATGAGCCTCCCATGTGTGATTTGCATAAACAGTTAGCGGTTATATTAACAGCCTTTTCATTTAGTTTATGTTCTTTTAAATTTGCAAGTTATGTTAAGGGCTACTTTCAGCATTATAAAGA
>TCONS_00001368
ATGTTGAGCATGGAGGTGCAGGTGGACGTGAGCTGCTGTAAATCAGTAGGAACTGATCTGTCCATGCTGGATATTGAGGATTTCATCAGTCAAATCTGTCAGCTGAAGAAAGAGGTGGCGTCGCTGGAGGCCAAgctgagagaaagaggagagaaaCTCCAGCCAGAGCGGCAGGATTCGCTGTGCGGCGTCAGAGCTCAGAGATCCAGAGACACGCAGAACTCAGAGCTCAGCCTGACTTTACTCTGTTATACTGACGCTCAGGATCATCAGAGCTCTGAGCCAGACGCTGGAGAACAGCAGACCACACTGAAGATGTGCTCCGTCAGACTGGAGGACTGCAGGAACCTGATCCAGAGCACAGAAAACACCACAGAAGAAGAGGATCAGAGAGACCCAGAGGATGATGATAGTGATTTTGATGAAGATGGGAAAGATGATGATGgaaatgaggatgatgatgatggaaaagatgatgatgaaaatgaggatgatgatgatggaaaAGATGATGAGGAAGATGTGGTCGATGATGATTTTATTCCTGCAGATACTAACAGTGGATCATCTGATGAAGAAGGAGCTCCGATATTAAAAGATAAGCCGAAAAACAAAAAATTCTCCTGCGCCACCTGTGGAAAACCATACGCCTCACGAAGAGATTTAGAGGTGCATGAAAAAAAGCACTCAGAAACGAAGGTCTTCATCTGCTGGAGATGTCATAGGTGCTTTCCCACGTTAGAGGAGAAGAAACTTCATTCCAAAGAGCATGTGGTAAAGAAAAGGTTTCAGTGTGAACAGTGCGGTAAGAACTTTGTAACTCCTTCTAGTTTAGCTATTCACATAACGACACACACGGGTGACCAGCGTGTCCAGTGTGACGTATGCAACAAATCATTCAGCACCAAAGCAAACCTGGAGGTTCATAAGAGAATCCACACGGGCGAGCGGCCGTATAAATGCCCTCACTGCGAGAAGAGCTTTTGCCACGGATCTCAATTAAAGAACCACGTCCGCATTCACACCAAGGAGAAGCCGTACCAGTGCAGCGAGTGCGGAAAAACCTTCGCAAAATCGGGCACTCTAAACTCGCATCTAAATATCCACTCTGAGGACAGGAGGTATCAGTGCAAATACTGCGACAAGCGATTCCGGTATAAACCGAGTCTGTTTACTCATGAGAAGGCTCACAGTGGAAAGAAGCAACACCTGTGCGCTGAATGTGGGATGAGTTTTATGACTACAAAACAACTTACTTATCACCAGAGAacccacactggagaaaaaccgtacCTGTGCAACATCTGTGGCCGGGGTTTCAGTCAACCAGGCATCTTAATAAACCAcatgaggactcacactggagaaagaccctataagtgttcacactgcgacaagacgTTTGCACGATCTGATGTGATGAAGACCCACGAGAGGGTTcataccggagagaaaccgtaccgCTGCTCCATCTGCGGAGAGAGGTTTGCGTATTTAGGAAGTTTTCAGAGCCACCAGAAGAAACATGGAGGAGAACTAGTGGATGAGCAGATCAGCGCATGATGGAGAATTGACGACTGAGTGTTTCTGACAGCATTTCTTCATCCTAGTCCTCACTCTCCACTGCTCTGCGTATTTTGATCTTTTAAAAAAGAAGACAGCATTTACTTCTATAGTAAGggtcacccctgataaataaagggactaaactgaagaaaaatcaataaatttttattacaGCGGTGGTTCAATCTGTTTGACATCGTCATTTGAGCAGCCAGTAAATACACATTCATGCACCATCAAAGTATTGTAGAGTGCGACATTTTGCCATGTTAAAGTAAGGttcaaaaataaaagtgttgcCTCGTTCAAATAAAGAttttgaaatgaaa

Function

symbol description
si:ch73-236c18.9 Predicted to enable dGTPase activity. Predicted to be involved in dGTP catabolic process; defense response to virus; and regulation of innate immune response. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096528

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001367 False 2138 mRNA 0.44 4 58608978 58613487
TCONS_00001368 True 1895 mRNA 0.45 3 58609885 58613331

Neighbor

gene id symbol gene type direction distance location
XLOC_000866 si:ch73-221f6.1 coding upstream 2488 58601680 ~ 58606490 (+)
XLOC_000865 NA coding upstream 13211 58586353 ~ 58595767 (+)
XLOC_000864 NA coding upstream 23846 58577919 ~ 58585132 (+)
XLOC_000863 zgc:172091 coding upstream 71622 58535306 ~ 58537356 (+)
XLOC_000862 si:ch73-236c18.9 coding upstream 78493 58508790 ~ 58530485 (+)
XLOC_000868 si:ch73-221f6.3 coding downstream 485 58613972 ~ 58618868 (+)
XLOC_000869 zgc:174890 coding downstream 7466 58620953 ~ 58622498 (+)
XLOC_000870 si:ch73-221f6.4 coding downstream 14678 58628165 ~ 58632064 (+)
XLOC_000871 NA coding downstream 33198 58646685 ~ 58669075 (+)
XLOC_000872 LO017784.1 coding downstream 63947 58677434 ~ 58681545 (+)
XLOC_000837 BX927298.1 non-coding upstream 435389 58160151 ~ 58173589 (+)
XLOC_000829 BX469930.2 non-coding upstream 591614 58003615 ~ 58017364 (+)
XLOC_000826 NA non-coding upstream 677386 57926893 ~ 57931592 (+)
XLOC_000874 NA non-coding downstream 164566 58778053 ~ 58782292 (+)
XLOC_000876 NA non-coding downstream 239683 58853170 ~ 58854377 (+)
XLOC_000878 NA non-coding downstream 342579 58956066 ~ 58959457 (+)
XLOC_000879 NA non-coding downstream 361530 58975017 ~ 58976687 (+)

Expression


Co-expression Network