XLOC_000869 (zgc:174890)


Basic Information

Item Value
gene id XLOC_000869
gene name zgc:174890
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58620953 ~ 58622498 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001372
TGTGAGGGGCGCTGTGGTGATTTTCTACCGGATCACCAAACCACTGAAGGAGTAAACACTGGAGCCCACGATGGAAACGATGATGTTGAGCATGGAGGTGCAGGTGGACGTGAGCTGCTGTAAATCAGTAGGAACTGATCTGTCCATGCTGGATATTGAGGATTTCATCAGTCAAATCTGTCAGCTGAAGAAAGAGGTGGCGTCGCTGGAGGCCAAgctgagagaaagaggagagaaaCTCCAGCCAGAGCGGCAGGATTCGCTGTGCGGCGTCAGAGCTCAGAGATCCAGAGACACGCAGAACTCAGAGCTCAGCCTGACTTTACTCTGTTATACTGACGCTCAGGATCATCAGAGCTCTGAGCCAGACGCTGGAGAACAGCAGACCACACTGAAGATGTGCTCTGTCAGACTGGAGGACTGCAGGAAGCTGATCCAGAGAACTGAAAACACCACAGAAGAAGATCAGAGAGaccaggaggaggaggaggaggaggatgatgatgatgatgatggtggtgatgatgatgaaaatggaAAGGATGATAaggaaaatgatgatgatgatgatgaatttaTTCCTGCAGGT

Function

symbol description
zgc:174890 Predicted to enable metal ion binding activity. Is expressed in EVL; epidermis; and periderm.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-6213 Predicted to enable metal ion binding activity. Is expressed in EVL; epidermis; and periderm.

Ensembl:

ensembl_id ENSDARG00000105176

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001372 True 589 mRNA 0.50 3 58620953 58622498

Neighbor

gene id symbol gene type direction distance location
XLOC_000868 si:ch73-221f6.3 coding upstream 2085 58613972 ~ 58618868 (+)
XLOC_000867 si:ch73-236c18.9 coding upstream 7466 58608978 ~ 58613487 (+)
XLOC_000866 si:ch73-221f6.1 coding upstream 14463 58601680 ~ 58606490 (+)
XLOC_000865 NA coding upstream 25186 58586353 ~ 58595767 (+)
XLOC_000864 NA coding upstream 35821 58577919 ~ 58585132 (+)
XLOC_000870 si:ch73-221f6.4 coding downstream 5667 58628165 ~ 58632064 (+)
XLOC_000871 NA coding downstream 24187 58646685 ~ 58669075 (+)
XLOC_000872 LO017784.1 coding downstream 54936 58677434 ~ 58681545 (+)
XLOC_000873 CABZ01084617.1 coding downstream 112828 58735326 ~ 58744037 (+)
XLOC_000874 NA coding downstream 155555 58778053 ~ 58782292 (+)
XLOC_000837 BX927298.1 non-coding upstream 447364 58160151 ~ 58173589 (+)
XLOC_000829 BX469930.2 non-coding upstream 603589 58003615 ~ 58017364 (+)
XLOC_000826 NA non-coding upstream 689361 57926893 ~ 57931592 (+)
XLOC_000876 NA non-coding downstream 230672 58853170 ~ 58854377 (+)
XLOC_000878 NA non-coding downstream 333568 58956066 ~ 58959457 (+)
XLOC_000879 NA non-coding downstream 352519 58975017 ~ 58976687 (+)

Expression


Co-expression Network