XLOC_000873 (CABZ01084617.1)


Basic Information

Item Value
gene id XLOC_000873
gene name CABZ01084617.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 58735326 ~ 58744037 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001375
ATGGCTAAGCTTATTTTGGCCAATCAGAGAAGCATTAAAATTGTGTGTTTGGGATTGGCAGGTCTGAGTCGAGCCGCGATGCCCTTTGGTCTGATGAGGAGAGAGCTGGCGTGTGAAGGTTACCCCATCGAGCTGCGCTGCCCAGGAAGTGATGTCATCATGATTGAGACCGCCAACTACGGCCGCACAGACGACAAGATCTGTGATGCCGACCCCTTCCAGATGGAGAACGTGCAGTGCTACCAGCCTGACGCCTTCAAGATCATGTCACACAGgtgtaataACAGGACGCAGTGTGTGGTGGTGGCCGGTGCAGACGTGTTTCCTGATCCCTGTCCTGGAACTTACAAATACCTGGAGATCCAGTATGAGTGTGTCCCTTACAGtgagtga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112310

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001375 True 393 mRNA 0.52 3 58735326 58744037

Neighbor

gene id symbol gene type direction distance location
XLOC_000872 LO017784.1 coding upstream 53781 58677434 ~ 58681545 (+)
XLOC_000871 NA coding upstream 66251 58646685 ~ 58669075 (+)
XLOC_000870 si:ch73-221f6.4 coding upstream 103262 58628165 ~ 58632064 (+)
XLOC_000869 zgc:174890 coding upstream 112828 58620953 ~ 58622498 (+)
XLOC_000868 si:ch73-221f6.3 coding upstream 116458 58613972 ~ 58618868 (+)
XLOC_000874 NA coding downstream 34016 58778053 ~ 58782292 (+)
XLOC_000875 tmed1b coding downstream 96852 58840889 ~ 58850686 (+)
XLOC_000876 NA coding downstream 109133 58853170 ~ 58854377 (+)
XLOC_000877 trip10b coding downstream 177990 58922027 ~ 58935898 (+)
XLOC_000878 NA coding downstream 212029 58956066 ~ 58959457 (+)
XLOC_000865 NA non-coding upstream 139559 58586353 ~ 58595767 (+)
XLOC_000864 NA non-coding upstream 150194 58577919 ~ 58585132 (+)
XLOC_000837 BX927298.1 non-coding upstream 561737 58160151 ~ 58173589 (+)
XLOC_000829 BX469930.2 non-coding upstream 717962 58003615 ~ 58017364 (+)
XLOC_000879 NA non-coding downstream 230980 58975017 ~ 58976687 (+)
XLOC_000888 FP015850.1 non-coding downstream 387255 59131292 ~ 59131406 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G117251 NA non-coding NC_048566.1 CM023220.2 16654764 ~ 16656434 (+)
bowfin (Amia calva) AMCG00008598 LOC106594611 coding CM030126.1 CM030126.1 5263152 ~ 5276428 (-)