G145873


Basic Information

Item Value
gene id G145873
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3187781 ~ 3188153 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165747
TGCGCAATCGCTCCAGCGGCCTCGTTCAGCTCCCACAACACTCGGTCCTGCTCTGCTTCATACTACAATAACTGCATAATAACCGCATCCATGAACATGATTTCTTCCCGAGTCCTATCCCAATTGTTTTCCACCGGCTGTGAGGTGAAGACCACATGTCCCAAGATTCCGTGCTCAAACTTGGCGTCATCAAGCTACGCCTTTGTTTTGAATAGGCCTTTAGCGACCTCTAGCGGACAGAAAATATTACATATTGCACCTTTAATGCGGAGTGCTCTGATATAAAACAGAGAGATGTTTTAGAAACAAATCACTGATGCTTCTGAAATTAGCGAGGTCTTTCTATAAAGTACAGATGTAATGTGTAAGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165747 True 373 lncRNA 0.44 1 3187781 3188153

Neighbor

gene id symbol gene type direction distance location
CI01000028_03155827_03157194 NA coding upstream 30587 3154001 ~ 3157194 (+)
CI01000028_03097428_03106553 SRPR, SRPRA coding upstream 80253 3097428 ~ 3107528 (+)
CI01000028_03074166_03080440 NA coding upstream 106879 3074039 ~ 3080902 (+)
CI01000028_03053581_03067840 PEX16 coding upstream 119273 3053454 ~ 3068508 (+)
CI01000028_02915708_02935354 NA coding upstream 252351 2915513 ~ 2935430 (+)
CI01000028_03232374_03235527 PSD8, PSMD8 coding downstream 44025 3232178 ~ 3235586 (+)
CI01000028_03243337_03247393 SPRED3 coding downstream 52803 3240956 ~ 3248380 (+)
CI01000028_03334040_03380006 APLP2 coding downstream 145887 3334040 ~ 3380553 (+)
CI01000028_03385787_03404112 PRDM10 coding downstream 197389 3385542 ~ 3404216 (+)
CI01000028_03407831_03417774 NA coding downstream 219678 3407831 ~ 3418566 (+)
G145870 NA non-coding upstream 26133 3161421 ~ 3161648 (+)
G145826 NA non-coding upstream 61424 3126071 ~ 3126357 (+)
G145856 NA non-coding upstream 135377 3052179 ~ 3052404 (+)
G145843 NA non-coding upstream 164101 3023146 ~ 3024220 (+)
G145842 NA non-coding upstream 166561 3020991 ~ 3021220 (+)
G145801 NA non-coding downstream 21113 3209266 ~ 3212417 (+)
G145799 NA non-coding downstream 26456 3214609 ~ 3216426 (+)
G145895 NA non-coding downstream 217020 3405173 ~ 3406205 (+)
G146615 NA non-coding downstream 235172 3423325 ~ 3423603 (+)
G146617 NA non-coding downstream 236120 3424273 ~ 3424485 (+)
CI01000028_00525538_00533862 NA other upstream 2665850 524647 ~ 535245 (+)
G147462 NA other downstream 1770550 4958703 ~ 4989838 (+)
G147636 NA other downstream 2027937 5216090 ~ 5216611 (+)
G147693 NA other downstream 2252301 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4281739 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 5114094 8302247 ~ 8504940 (+)

Expression


Co-expression Network