G145826


Basic Information

Item Value
gene id G145826
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3126071 ~ 3126357 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU165694
CCTTGTTTCTTCAGGTGGCTGGTCAAATTCAGGGCGGTCTGCTGGAGTAATCATGTTTTCTAGCATTCGCTTTCTTTGTCTTCTTCTCTGTTGTGCTTTTCTCCATTTGTCTCTTTTGCTTTGTTTCTCACTCTCACTCAACTCTGCGATTGGTTTCACATTTCCTAGTCTTATTAGTCTGTACCATGCCTCTCTCTGCTTTTCTAAATATTGTGCCCTTCTTGAGGGATCAGCATCCCGCCGAGCCCTGTATCTTCGCTGTTTCTCTGCTGCTGACATCTGTCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165694 True 287 lncRNA 0.45 1 3126071 3126357

Neighbor

gene id symbol gene type direction distance location
CI01000028_03097428_03106553 SRPR, SRPRA coding upstream 18543 3097428 ~ 3107528 (+)
CI01000028_03074166_03080440 NA coding upstream 45169 3074039 ~ 3080902 (+)
CI01000028_03053581_03067840 PEX16 coding upstream 57563 3053454 ~ 3068508 (+)
CI01000028_02915708_02935354 NA coding upstream 190641 2915513 ~ 2935430 (+)
CI01000028_02738747_02743091 NA coding upstream 382980 2738483 ~ 2743091 (+)
CI01000028_03155827_03157194 NA coding downstream 27644 3154001 ~ 3157194 (+)
CI01000028_03232374_03235527 PSD8, PSMD8 coding downstream 105821 3232178 ~ 3235586 (+)
CI01000028_03243337_03247393 SPRED3 coding downstream 114599 3240956 ~ 3248380 (+)
CI01000028_03334040_03380006 APLP2 coding downstream 207683 3334040 ~ 3380553 (+)
CI01000028_03385787_03404112 PRDM10 coding downstream 259185 3385542 ~ 3404216 (+)
G145856 NA non-coding upstream 73667 3052179 ~ 3052404 (+)
G145843 NA non-coding upstream 102391 3023146 ~ 3024220 (+)
G145842 NA non-coding upstream 104851 3020991 ~ 3021220 (+)
G145792 NA non-coding upstream 140426 2985402 ~ 2985645 (+)
G145787 NA non-coding upstream 152491 2972685 ~ 2973580 (+)
G145870 NA non-coding downstream 35064 3161421 ~ 3161648 (+)
G145873 NA non-coding downstream 61424 3187781 ~ 3188153 (+)
G145801 NA non-coding downstream 82909 3209266 ~ 3212417 (+)
G145799 NA non-coding downstream 88252 3214609 ~ 3216426 (+)
G145895 NA non-coding downstream 278816 3405173 ~ 3406205 (+)
CI01000028_00525538_00533862 NA other upstream 2604140 524647 ~ 535245 (+)
G147462 NA other downstream 1832346 4958703 ~ 4989838 (+)
G147636 NA other downstream 2089733 5216090 ~ 5216611 (+)
G147693 NA other downstream 2314097 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 4343535 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 5175890 8302247 ~ 8504940 (+)

Expression


Co-expression Network