G152297


Basic Information

Item Value
gene id G152297
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2286534 ~ 2286890 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU172984
AGCTACTCAATATTAATCTATATGTACTGTCATATAAAGACAACATAACGCCCGCAATCATTCTGTGTGAATATATACAGTCCTGGTCAAAATTATTGGCACCCTTGATAAATATGAACAAAAGCCTGTGAAAATAAATCTGCATTGTTAATCCTTTTGTAAAAAAAATAAAATTAAATAAATAAATAAAAAAAATCTAACCTTTCATTGAAGAAAAAAAATTAAAAATGGGTGGATGGGGATTGGGATCTCATTATTAAATAAATGTTTTTCTGTAATACACATTAGCACCATGTCCTTTTGCCAAGAGATCAGAGACCATTCCACCATATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172984 True 335 lncRNA 0.30 2 2286534 2286890

Neighbor

gene id symbol gene type direction distance location
CI01000029_02192568_02196383 HDDC2 coding upstream 89843 2191911 ~ 2196691 (+)
CI01000029_02102219_02105661 ESCO2 coding upstream 180508 2102070 ~ 2106026 (+)
CI01000029_02069731_02079236 SCARA3 coding upstream 207278 2069293 ~ 2079256 (+)
CI01000029_02037027_02050337 REPS1 coding upstream 236124 2037027 ~ 2050410 (+)
CI01000029_01941376_01941659 NA coding upstream 344014 1941376 ~ 1942520 (+)
CI01000029_02343103_02352351 NA coding downstream 54059 2340949 ~ 2352782 (+)
CI01000029_02427134_02429596 NA coding downstream 139208 2426098 ~ 2430095 (+)
CI01000029_02432238_02441531 NA coding downstream 145348 2432238 ~ 2441589 (+)
CI01000029_02445216_02480549 NA coding downstream 158083 2444973 ~ 2480664 (+)
CI01000029_02488613_02490983 NA coding downstream 201460 2488350 ~ 2491371 (+)
G152266 NA non-coding upstream 34025 2252305 ~ 2252509 (+)
G152262 NA non-coding upstream 36678 2249655 ~ 2249856 (+)
G152245 NA non-coding upstream 58847 2225603 ~ 2227687 (+)
G152244 NA non-coding upstream 61468 2224844 ~ 2225066 (+)
G152222 NA non-coding upstream 88641 2151180 ~ 2197893 (+)
G152347 NA non-coding downstream 138873 2425763 ~ 2425994 (+)
G152348 NA non-coding downstream 162524 2449414 ~ 2449733 (+)
G152349 NA non-coding downstream 163894 2450784 ~ 2451070 (+)
G152281 NA non-coding downstream 195495 2482385 ~ 2484946 (+)
G152359 NA non-coding downstream 202198 2489088 ~ 2489513 (+)
CI01000029_01526863_01527414 NA other upstream 758635 1526754 ~ 1527899 (+)
G151495 NA other upstream 1914612 366541 ~ 371922 (+)
G151415 NA other upstream 2061289 170521 ~ 225245 (+)
G152451 NA other downstream 474704 2761594 ~ 2762939 (+)
G153475 NA other downstream 1258235 3545125 ~ 3562004 (+)
G153790 NA other downstream 2446699 4733589 ~ 4740107 (+)
G154587 NA other downstream 2984130 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 3170351 5461497 ~ 5470346 (+)

Expression


Co-expression Network