Gene
RNA
| Item | Value |
|---|---|
| gene id | G154234 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 4402831 ~ 4403061 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: ARF GTPase-activating protein GIT1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175124 | True | 231 | lncRNA | 0.40 | 1 | 4402831 | 4403061 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_04272476_04278373 | RUNX2A, RUNX2 | coding | downstream | 123850 | 4271586 ~ 4278981 (-) |
| CI01000029_04246988_04247383 | RUNX2B | coding | downstream | 153780 | 4245107 ~ 4249051 (-) |
| CI01000029_04144327_04203475 | MARK3B, MARK3 | coding | downstream | 199356 | 4144327 ~ 4203475 (-) |
| CI01000029_04138798_04141675 | LAPTM4A, LAP4A | coding | downstream | 261156 | 4138798 ~ 4141675 (-) |
| CI01000029_04125071_04135324 | MATN3, MATN3A | coding | downstream | 267457 | 4124741 ~ 4135374 (-) |
| CI01000029_04433110_04458444 | MUT | coding | upstream | 29993 | 4433054 ~ 4458444 (-) |
| CI01000029_04460778_04463540 | FKBP1B | coding | upstream | 57098 | 4460159 ~ 4463540 (-) |
| CI01000029_04485919_04510826 | MFSD2B | coding | upstream | 82858 | 4485919 ~ 4510826 (-) |
| CI01000029_04514094_04517849 | UBXN2A | coding | upstream | 110789 | 4513850 ~ 4517849 (-) |
| CI01000029_04577893_04580321 | NA | coding | upstream | 174622 | 4577683 ~ 4580974 (-) |
| G154198 | NA | non-coding | downstream | 7081 | 4395419 ~ 4395750 (-) |
| G154172 | NA | non-coding | downstream | 160833 | 4241705 ~ 4241998 (-) |
| G154171 | NA | non-coding | downstream | 163394 | 4239207 ~ 4239437 (-) |
| G154170 | NA | non-coding | downstream | 165757 | 4236762 ~ 4237074 (-) |
| G154169 | NA | non-coding | downstream | 166191 | 4235776 ~ 4236640 (-) |
| G154238 | NA | non-coding | upstream | 5520 | 4408581 ~ 4408799 (-) |
| G154239 | NA | non-coding | upstream | 6217 | 4409278 ~ 4409496 (-) |
| G154209 | NA | non-coding | upstream | 21863 | 4424924 ~ 4426968 (-) |
| G154229 | NA | non-coding | upstream | 120953 | 4524014 ~ 4529646 (-) |
| G154216 | NA | non-coding | upstream | 263294 | 4666355 ~ 4722192 (-) |
| CI01000029_03698769_03707177 | NA | other | downstream | 695579 | 3698572 ~ 3707883 (-) |
| G153891 | NA | other | downstream | 1116277 | 3248777 ~ 3286554 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 1810029 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 3108708 | 1292249 ~ 1294123 (-) |
| G154415 | NA | other | upstream | 583047 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 2767306 | 7170367 ~ 7170951 (-) |
| G156495 | NA | other | upstream | 2963266 | 7365007 ~ 7371921 (-) |
