CI01000030_09683547_09689191


Basic Information

Item Value
gene id CI01000030_09683547_09689191
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9682299 ~ 9689387 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09683547_09689191.mRNA
AGATTGTTTTCCACCATTTATTTAAAGTCTTAAGAGCCAGAACAATATATCAAATCCATAACACGTGTAGAGTGTGTGTGTGCGTGTGAACTAGTAGGGTGGTCAAACTCTCTCGTGGGAGGGTTCACACACCAGGTTCAGTGTTATCAGCAGATAGCCTTATTAGATCAGAGCTTTCGCTAAACAAGAGAGGAAAATGTTGCACACGCTTGTTTTGTTCTGTTTGTGTTGTCTGGTTGGTGTGTTTGCTGCTGAAACAAATGAAATACAGTCAGTGCCAGTGATGGAGGGAGATTCTGTCACTTTACACATTGATGCTACTGAAATACAGAAAGGAGACAATATACTGTGGAAATATGGAGCTGAAAAGCATGTTATAGCTGAAATCAGTAGAAATTATAAATTGTTCTACACATATAATGGTCCTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATCAACTAGAGATAAGGGGAGTGGATCTGACATCAAAAACATTCAATGTTTCTGTCTATGCTCATCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAGAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATTCATTCGCTAACCAGACTCAACATCTGAACATCACTCAACTCTGTCACACATGTGCAGAAAGCGTACCTTTATTGTACATAGTGCTGATCTCTACTGCTGCCTCTGGTTTTCTCTTGATTGTAGCTGCTGTCATTGGGATCTTCTGCATCTGCAGGAAAGAAAGAAAAACAGTCCAGAGACCGAAGGAAGACAGAACTGATTCAGCGTTGCGTAAACCAAAAACACGACAAAAGAAATCGAAGAAGGAGGCAGTGTATGAAAATGTCCCCAAAAAACGATGATCAAATACTGTCACTAATGGAAATAAGTGACCCCTGCTTTACACTTTTGGTTCCCTAGTCGGTCTCTCGACACTGCATCATAGCTGACGCTTGGGGTTATCACCTCTTTTCTCGAATCTACTGAAGCCTTATGAAATCTTATGAAAGCCCGCCAATGGCGTTTAAACTCGTGAAATTGAGGTGGGTTCCCCCGCGCTATGAGGCGGCGCTGAACACCATTGCTTCAGAATCTTTTTCTTCAGCTACAAGAAGCCATCTACAGCTCGCCGTTGAGGTATGCTCATCCACGGGATGGTGCCTTCATTGCCACTCCCCTGCAGCGTTCCAGTGAGTATTACTTTTCTTTCAGATGCCTTCTGGACTGCGGTGTTTCTGCCTGGGTGATGCCCACTCGGAAGCGGTGCGGCATGAGTCCATCTGCCCTCATTAACAGTGGTGGACCTTAGAAACTCTGGTGATGAGCTCATGCTGACTAAGTGTCCACATTACTCTCACCCAACCCTTCAGGATATAGCCTGGCTTCTCAAGGTTCAGTCGCCCACTCTTCACGTGATAAGCAAGCCCCCCAACTTAGGGCAGCCTTCCCAGGGTTCCCTTCTCTGAGAGGAGGGAACAAGCTACATAGCTCAGAGTCTTTGTCAGCTGCACTCTGCTTCAGTCCAAGATTCTGAGGCAATGGCGTTCAGCGCCGCCTCTGTTTCGCCTGCTTGAATGCCATTAGCAGGCAAATTCTCCCCTGTGAGATTTCCAACAGTATCTCATGACCAATTTGTATGTATTTTACGAGGTGGCTAATTCGTACGATTCATATGATTGATCTGAACTTCAGTGACGGGTAGGTTTAGGGGTAGGTCATACGTACGAATTCATACGAATTTGGCAAAATTCAACTTGTAAAATACTTACGATTTAGCAAAAAACTAATTGCTGTGAGATCGGGTTGGAGATTTCATAAGGCTTCAGTAGATTAGAGGAAGGAGGGGATAACCCCGATCGTCAAGCTATGACGCAGTGTCTCGTTCCCTCCTCTCAGGGAACCGAGGTTACGCTAGGTAACCAGAGATGTTTTGTTCACATTTATTCTCTGCCAGGATGTCTCAGTTTTGTTTTCACTCTTTGTATCATATCTTTTGGTGTCATTGTGATGTCTGAATTTTTGTTTTAAGTTAGTGGTTTACCAGTATAGCATACAGAAAATGTTCTATTTTAATTTAGTTTATGAAAATTGACTTACCGTTTATTATTAAA

Function

NR:

description
hypothetical protein cypCar_00037883

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09683547_09689191.mRNA True 2341 mRNA 0.43 6 9682299 9689387

Neighbor

gene id symbol gene type direction distance location
CI01000030_09639163_09647509 NA coding downstream 34735 9638142 ~ 9647564 (-)
CI01000030_09579086_09594020 NA coding downstream 88186 9579064 ~ 9594113 (-)
CI01000030_09561245_09573575 NA coding downstream 108192 9561162 ~ 9574107 (-)
CI01000030_09500443_09502785 NA coding downstream 179437 9500263 ~ 9502862 (-)
CI01000030_09448873_09453673 NA coding downstream 228207 9448772 ~ 9454092 (-)
CI01000030_09698618_09704345 NA coding upstream 9210 9698597 ~ 9704405 (-)
CI01000030_09712337_09717140 NA coding upstream 22684 9712071 ~ 9718569 (-)
CI01000030_09742337_09743235 NA coding upstream 52809 9742196 ~ 9744122 (-)
CI01000030_09768958_09783689 NA coding upstream 79318 9768705 ~ 9783793 (-)
CI01000030_09791043_09795157 NA coding upstream 100878 9790265 ~ 9795291 (-)
G163760 NA non-coding downstream 47137 9629900 ~ 9635162 (-)
G164097 NA non-coding downstream 126127 9555641 ~ 9556172 (-)
G164094 NA non-coding downstream 137358 9544721 ~ 9544941 (-)
G164092 NA non-coding downstream 141237 9540767 ~ 9541062 (-)
G164084 NA non-coding downstream 143103 9517539 ~ 9539196 (-)
G163784 NA non-coding upstream 37218 9726605 ~ 9847985 (-)
G163684 NA non-coding upstream 44325 9733712 ~ 9805881 (-)
G164149 NA non-coding upstream 66492 9755879 ~ 9756344 (-)
G164150 NA non-coding upstream 86451 9775838 ~ 9798951 (-)
G164151 NA non-coding upstream 106317 9795704 ~ 9798685 (-)
G164071 NA other downstream 206035 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 380150 9276431 ~ 9294802 (-)
G163873 NA other downstream 748317 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1489813 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1889917 7788797 ~ 7792198 (-)
CI01000030_10103451_10131419 NA other upstream 426128 10102944 ~ 10133765 (-)
CI01000030_10343879_10366274 NA other upstream 676030 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1804951 11494183 ~ 11495854 (-)

Expression


Co-expression Network