CI01000030_09768958_09783689


Basic Information

Item Value
gene id CI01000030_09768958_09783689
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9768705 ~ 9783793 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09768958_09783689.mRNA
AGATGCAAATGCAGCGCTTGAACTAGGAGTGTCAAACTCTTTCATCATCAGAGGATTCACTCAACACTTCAACAGTTCTGCTGTTAGATCACACACTGAAGAAAATGTGTCACAAGTTGGTTTTGTTCTGTTTGTGCTGCTGGAGTCTGACTGGTGTGTTTGGTGATTCATTGTCAGTGATAGAGGGAGATTCTGTCACTTTATACACTGATCTTACTGAAATACATGAAGATGACGACATAGAGTGGACATTTGGAGCTGAAAAATCTCTCATAGCTAAAATAAAGAAAAAGAAGCAAACATTCAACACATATGATGGTCCTGATGGGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATCTCTGACCATCACAAACACCACAACTGAACATACTGGAGTTTATCAACTAAAGATAAGTGGAGCAAATCTGACAAAAAAAACATTCAACGTTTCTGTCTATGCTCATCTGCCTGTTCCTATGGTTATCAGAAACTGTTCTTCAATATCATCACCACCATTTTCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCACGTGACTCTCTCCTGGTACAAAGGAAACAGTTTGTTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGTTCCTTCAGCTCCTCCAGTCTCAGTCTCTCTGATAGTGCTGATCTCTGCTGCTGGATCTCTGTTGATTGTTGCTGCCGTCGGGATCTTCTGCATCTGCAGGAAATGTGTGTTTAGTGATTCAGTGTCAGTGATGGAAGGAGATTCTGTCACTTTGTACACTGATCTTACTGAAATACATGAAGGCGACAATATACAGTGGACATTTGGAACTGAAAACTCTTTCATAGCTAAAATGAAGAAAAAGAAGCAAAACTTCTCCATATATAACAGTACTGATGGGAGATTCAGAGACAGACTGAAGATGGACAATCAAACTGGATCTCTGACCATCAAAAACATCACAACTGAACATGCTGGAGTTTATGAACTAGAGATAAGTGGAGCACATCTGACAACAAAAACATTCAATGTTTCTGTCTATGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGGGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGAAACCAGACTCAACATCTGGACAACATCACACAACTCTGTCACACATGTGCAGCTCCTCCAGTCTCAGGGTCTCTGATAGTGCTGATCTCTGCAGCTGCTGCTGCTGGTGGTTTTCTGTTGATTGTAACTGCTGTCGGGATCTTCTGCATCTACAGGAAATGCAAAAATTCAGAAATCAAAGAAGGAGCCTGTGTATGCAAATTTCACCAAAATACGATGATCAAAACAGAAAGGAGAACTGATACAGGCCCTGACTCACACCTTTTAGTTCATTTTTAGCCTATTCTCTGCTAATACTCAAGACCTACTCAAAATATAGAACATCCAGAAACTCAAATGTATGTTCTATTTTTAGCTCAACATGCATGTTCTCTGTACTCCTGTTTAAAGAGAAAATGGGCAAATTCAGCACAATCATCGCTCTCTAGTGGGCAAAGCAGCTAAGAATAGCACTGCTTTTGCACGATAGGGTGCGCTATGATGCTGCTGTTCTCACAGTCACAGTCACTGCTCTGATGTTTATAATAATAAA

Function

NR:

description
Zgc:171601 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09768958_09783689.mRNA True 1968 mRNA 0.41 8 9768705 9783793

Neighbor

gene id symbol gene type direction distance location
CI01000030_09742337_09743235 NA coding downstream 24583 9742196 ~ 9744122 (-)
CI01000030_09712337_09717140 NA coding downstream 50136 9712071 ~ 9718569 (-)
CI01000030_09698618_09704345 NA coding downstream 64300 9698597 ~ 9704405 (-)
CI01000030_09683547_09689191 NA coding downstream 79318 9682299 ~ 9689387 (-)
CI01000030_09639163_09647509 NA coding downstream 121141 9638142 ~ 9647564 (-)
CI01000030_09791043_09795157 NA coding upstream 6472 9790265 ~ 9795291 (-)
CI01000030_09812332_09814520 NA coding upstream 28399 9812192 ~ 9814719 (-)
CI01000030_09819566_09824633 NA coding upstream 35409 9819202 ~ 9826446 (-)
CI01000030_09828173_09846949 NA coding upstream 44265 9828058 ~ 9847048 (-)
CI01000030_09857554_09858116 NA coding upstream 73525 9857318 ~ 9858252 (-)
G164149 NA non-coding downstream 12361 9755879 ~ 9756344 (-)
G163807 NA non-coding downstream 41285 9547295 ~ 9727420 (-)
G163760 NA non-coding downstream 133543 9629900 ~ 9635162 (-)
G164097 NA non-coding downstream 212533 9555641 ~ 9556172 (-)
G164094 NA non-coding downstream 223764 9544721 ~ 9544941 (-)
G164151 NA non-coding upstream 11911 9795704 ~ 9798685 (-)
G164165 NA non-coding upstream 124879 9908672 ~ 9909162 (-)
G164167 NA non-coding upstream 135817 9919610 ~ 9981402 (-)
G164071 NA other downstream 292441 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 466556 9276431 ~ 9294802 (-)
G163873 NA other downstream 834723 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1576219 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1976323 7788797 ~ 7792198 (-)
CI01000030_10103451_10131419 NA other upstream 331722 10102944 ~ 10133765 (-)
CI01000030_10343879_10366274 NA other upstream 581624 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1710545 11494183 ~ 11495854 (-)

Expression


Co-expression Network