CI01000030_09819566_09824633


Basic Information

Item Value
gene id CI01000030_09819566_09824633
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9819202 ~ 9826446 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09819566_09824633.mRNA
ATAACACTGGTAGGTCTACAACACTACAACTGAATAGTTACAAATGTAGAAACAATCAATTTTCCTCTACATAATGGTGTAGTTGAATCTAACAGCAGGGGTTAATTCAATTGAAAAAGTGCTAGTGAGCGCCATCTAGTGTTTAAAATAAGACTTCACTTCTTTTGGAATATTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTTGTGCCGTTTTACACCCGTAAGACCTTTGTTGATCTTCGGAACGCAAATTAAGATATTTTTGTTTAAATCCGATGGCTCCGTGAGGCCTACATAGGGAGCAATGACATTTCCTCTCTCAAGATCCATAAAGGTACTAAAAAAATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGTGCCAAAAAAAACAAAATAACGAATTATTTAGTGATGGCCGATTTCAAAACACTGCTTCAGGAAGATTCGGAGCGTAATGAATAAAATGAGTTTTTAAAATATTACATTTTCCATGTTTTATAGCGGTTGTACCGAATGACCTGATGTTTTGGGACATGCGTATGAGCAAGTGAAAACATGAATTTTTCAAGTAGTTAAGAGAGAGTTAGTTACTTTGCTTCACAACCATGTGGTCCTTTGCAGGTGTCTGAATGATGTCACATCCTGTCACATGATATTGAACGCATGACTTGATCCAAAACGGTCCCTTTATATTGGTTACTCCGAATGACATCAATGAAATTCATTTTTCCAGATATTCTCTCTCATAGCAAAGAAACGACTTCTACACATAATTTTAATACCCTTTCGCACTATGTTAATATATGATGTTATAAAATCATGCCAGAATAAAAAATACATACATTTATTACATTTTAAGATATTTTAATCACTAATGAAATGGCTGTATTGGCCTTTGGACGGTTAAACCGAATGACCTTTTGACACTTCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCTTTTGGATTCAATAAAAGAGATCTTGTTGCACTACCTTACATACTTTGGATGTCATATCTTTGTTTTTTATTATTTTTAAGGCCTTTGGACAAAAACTGACCTGTCACGTCATTGACCCATATATTAACTTAAAAAACAAAATAATAATAATAACAACTTTCAGATTAAACTTGTGAATGTCAGTGTTAAATATGATGATTGTGTTTCTGTCTCTGTGTCAAATGCAGTTTCTCATGTTTCAGTTCAAAGAAGCAGGAAGAAACTCGTCACCTACAAACGAACACAGTCACACCTGATCTGAATAAACTATCTCTTCAAGATGTTCGTCCAGCTCAAACCACATTTCTGAAGAAAAACCACCGCAGCAGGTTTCAGTTTGACTGAACGACACTAAAACTAGCACAGAGAGATCAGACACGATTTGAACTTTGTACTTTTTTTTCAAAGACTAAAACTGAGAACTGAATAAATATACACAATTTTAAAATCACAATGGTTTATTTACATATGTGACTTGAAGGAAACCAAAAGTAATCAGATTACATTATTTTCATATTGTGGTGCTTGGATTACGTTACTGGATACTTTTTTAAGTAAGTGTGCAAATGCAGCGAGTGAACAGGAGGGTCAAACTCTTGTGGGAGGATTCATATACGCTTGAATGATTTCAGCAGATAGTTTTATTAAAGCAGATGCTGAACGAATGAAGAAAATGCTTCACATGTTTGTTTTGTTCTGTTTGTACTGGATGAGCCTGACTGGTGTGTTTGCTGCTGAAACAAATGAAATACAGTCAGTGCCAGTGATGGAGGGAGATTCTGTCACTTTATACATTGATGCTGCTGAAATACAGAAAGGCGACAATATACTGTGGAAATATGGAGCTGAAAAGCATGTTATAGCTGAAATCAGTAGAAATTATGGATTGTTCTACACATATAACGGCACTGATGGGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATTTCTGACCATCACAAACATCAGGACTGAACATGCTGGAGTTTATCAACTAGAGATAAGGGGAGTGGATCTGACATCAAAAACATTCAATGTTTCTGTCTATGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGGGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGCGTCTGATCTCAGCATTAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATTCATTCACTAACCAAACAAGACATCTGGACATCACTCAACATCACACATGTGCAGATCAGACTGATTCAACCACATTAATGACTCTTTTCCTCTCTCCTTCAGTTCCTCCAGTCTCAGTCTCTCTGATAGTGTTGATCTCTGCTGGATCTCTGTTGATTATAACTCTGTTCAGGATCTTCTGTATCTGCGGAAAATTTCAGATTTGTGAAGATGAGAAAACTTCAGCCGTTCTGTTTCATCATCCAATGCTCTACGAAAGAAACACACATAAATTGAGAGCTGAAGAGTACAGTCACGTGGAGTATGTCTGTCAGCATGAGAAGATGATTCAGTCTTTACCAGATCCATCTGTGATCATTTTATAGTAAACTCCTGCAGTCTATAGTATTAATATTGAGATTGATATTAAGATCATCTCAAGACCTTGTTTTTGTTATTTTTAAAATATATCTAATGTATAAATTTGGTCATTTTAAGAATAAGTCAATGTGTATTCCCTGTTGTAATATTTGTAACATCATGCAATTGTTTGATGGTTATAGATTTCTTTCGTTTTCATCAGTTTTGATGAGTAAAAAAAGGGAGAAACGCTGCTAACAGACGTATTTTTTTTCAGTATTATAACAGCGCTGTTATAACTGAGTAACAACACATTTTGTTCCAAGGCTGTGATCTATTCTGTGACAAATGGGATTGGTTCATGAAACAAATCCTTCAAAATTCAATAAA

Function

NR:

description
hypothetical protein cypCar_00043464, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09819566_09824633.mRNA True 3164 mRNA 0.34 6 9819202 9826446

Neighbor

gene id symbol gene type direction distance location
CI01000030_09812332_09814520 NA coding downstream 4483 9812192 ~ 9814719 (-)
CI01000030_09791043_09795157 NA coding downstream 23911 9790265 ~ 9795291 (-)
CI01000030_09768958_09783689 NA coding downstream 35409 9768705 ~ 9783793 (-)
CI01000030_09742337_09743235 NA coding downstream 75080 9742196 ~ 9744122 (-)
CI01000030_09712337_09717140 NA coding downstream 100633 9712071 ~ 9718569 (-)
CI01000030_09828173_09846949 NA coding upstream 1612 9828058 ~ 9847048 (-)
CI01000030_09857554_09858116 NA coding upstream 30872 9857318 ~ 9858252 (-)
CI01000030_09861443_09865523 NA coding upstream 33806 9860252 ~ 9865926 (-)
CI01000030_09889631_09892529 NA coding upstream 63140 9889551 ~ 9892641 (-)
CI01000030_09899280_09916736 NA coding upstream 72639 9899085 ~ 9918906 (-)
G163684 NA non-coding downstream 13321 9733712 ~ 9805881 (-)
G164150 NA non-coding downstream 20251 9775838 ~ 9798951 (-)
G164151 NA non-coding downstream 20517 9795704 ~ 9798685 (-)
G164149 NA non-coding downstream 62858 9755879 ~ 9756344 (-)
G163807 NA non-coding downstream 91782 9547295 ~ 9727420 (-)
G164165 NA non-coding upstream 82226 9908672 ~ 9909162 (-)
G164167 NA non-coding upstream 93164 9919610 ~ 9981402 (-)
G164188 NA non-coding upstream 199778 10026224 ~ 10026855 (-)
G164071 NA other downstream 342938 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 517053 9276431 ~ 9294802 (-)
G163873 NA other downstream 885220 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1626716 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 2026820 7788797 ~ 7792198 (-)
CI01000030_10103451_10131419 NA other upstream 289069 10102944 ~ 10133765 (-)
CI01000030_10343879_10366274 NA other upstream 538971 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1667892 11494183 ~ 11495854 (-)

Expression


Co-expression Network