CI01000030_09791043_09795157


Basic Information

Item Value
gene id CI01000030_09791043_09795157
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9790265 ~ 9795291 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09791043_09795157.mRNA
AGAGCCAGAAGAGAATTTATATTCAACTATCAATCATTTGTGAAGAGCCTATGTGGTTAAAACTCGTGGGAGGATTCACACTTCAGCTCAAGTGCGTTCAGCTGAAAGTTTCAATAGATTAGACTTTTCAAAAAATGTTTCATGTGTTTGCTTTATGTTTGTGCTGGTGGCGTCTGACTGGTGTGTTTAGTGATTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTTTATACACTGAAGTTACTGAAATACGTGAAGGCGACGATACACTATGGAGATTTGGAGCTGAAAAATCTCTCATAACTAAAATGAAGAAAAAGAAGCAAATCTTCTCCATATATAACAGTACTGATGGGAGATTCAGAGACAGACTGAAGATGGACACTAAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATGAACTAGAGATAAGTGGAGCACATCTGACAACAAAAACATTCAATGTTTCTGTCTATGAAATCAAAGGAGCCTGTGTATGCAAATTTCACCAAAACACGATGATCAAAACAGAATGGAGAGCTGATACAGGCCCTGACTCACACCTTTTAGTTCATATTTATTCTCTGCTAATGCTCAAGTAGGCTTAGTAAAATATACAGTGGAACATCCAGATTCATGTTCTATTTTTAGGTCAACATGCATGGAAACTTTACATCATCGCTCTCTAGTGGCCAAAGCAGAAAATCACCTTTCTCTAAGAATAGTACTACTTTTGCACGATAGGGTGCGCTATGATGCTTCTGTTCTCACAGTCAATATGGAGGGCCAAACATGCAAAAACAATAAATAAATAATTTTAAAATAAATAAATATACAAGGAAACATGAAAAAAGAAAATGAGTATACTTTACTTCCTTATTTATGTATAATTGTATTTTTCCACATTTATTTTTTCATTAATTTAAATTATGCATGTATTTAATTCCACATTTATTCATTTATATATACATTTCTTTGTATGCTAATGGTGAAGTCGTGTTTTACCTCAGACATCAGCAGTTGAGCTCAGAGTGGCAGTACTGAAGCTTTGAGGCCACAGTGACACCTTGTGGTGTGACTAAACGAAACGCGAGAGGTTTTTTTTTTATTTTTTTATTTATTTTTATTCAATGCCACAAGAACAAAAGGTATTACATAATTACATTACCATATTAACATTAGCTGCCAGGGGGGAAAAAAAAAAAAAAAAAAAAAAGAGGAATGAGTTTCAGTGCTTTCAGAGCATTACATGTTTTCAGTGCTTTTTTGTTTTTGGTTTGTTCCAAAAGATTTACATATAATTTAAAGTTATTTATAAAATGTGAAAAATTTGGTTTACATTGAGCCCACTTCTTATGTATATGGTATTTTCCTAATAAA

Function

NR:

description
hypothetical protein cypCar_00034327

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09791043_09795157.mRNA True 1401 mRNA 0.34 3 9790265 9795291

Neighbor

gene id symbol gene type direction distance location
CI01000030_09768958_09783689 NA coding downstream 6472 9768705 ~ 9783793 (-)
CI01000030_09742337_09743235 NA coding downstream 46143 9742196 ~ 9744122 (-)
CI01000030_09712337_09717140 NA coding downstream 71696 9712071 ~ 9718569 (-)
CI01000030_09698618_09704345 NA coding downstream 85860 9698597 ~ 9704405 (-)
CI01000030_09683547_09689191 NA coding downstream 100878 9682299 ~ 9689387 (-)
CI01000030_09812332_09814520 NA coding upstream 16901 9812192 ~ 9814719 (-)
CI01000030_09819566_09824633 NA coding upstream 23911 9819202 ~ 9826446 (-)
CI01000030_09828173_09846949 NA coding upstream 32767 9828058 ~ 9847048 (-)
CI01000030_09857554_09858116 NA coding upstream 62027 9857318 ~ 9858252 (-)
CI01000030_09861443_09865523 NA coding upstream 64961 9860252 ~ 9865926 (-)
G164149 NA non-coding downstream 33921 9755879 ~ 9756344 (-)
G163807 NA non-coding downstream 62845 9547295 ~ 9727420 (-)
G163760 NA non-coding downstream 155103 9629900 ~ 9635162 (-)
G164097 NA non-coding downstream 234093 9555641 ~ 9556172 (-)
G164094 NA non-coding downstream 245324 9544721 ~ 9544941 (-)
G164151 NA non-coding upstream 413 9795704 ~ 9798685 (-)
G164165 NA non-coding upstream 113381 9908672 ~ 9909162 (-)
G164167 NA non-coding upstream 124319 9919610 ~ 9981402 (-)
G164071 NA other downstream 314001 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 488116 9276431 ~ 9294802 (-)
G163873 NA other downstream 856283 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1597779 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1997883 7788797 ~ 7792198 (-)
CI01000030_10103451_10131419 NA other upstream 320224 10102944 ~ 10133765 (-)
CI01000030_10343879_10366274 NA other upstream 570126 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1699047 11494183 ~ 11495854 (-)

Expression


Co-expression Network