CI01000030_11114957_11124683


Basic Information

Item Value
gene id CI01000030_11114957_11124683
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11114868 ~ 11125104 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11114957_11124683.mRNA
AGATAAATATCACAGTTCAGTCGTGTTTCAGATCAATCTGTGTTTTCAGACATTTTAAGAGTTACTATCGTGGGTTTTTCAGTGAACCGATGAAGAAAATGTTTCTCAGATTACTTTTGCTCTGTTTGTGTTTGTGGCGTCTGGGTGGTGTGTCTGGTGATTATAATGAAGTGAAGTCAGTGTCAGTGATGGAGGGAGATTCAGTCACTCTACACTCTGATCTTACTGAAATGAAGGATGGTAATGTGATTCAGTGGAGGTTTGAAAACACTTTAATAGCTGAAATCAATGTAACGGCCGACAACTTCACTGTAGATGATGATGATCTTGATGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACATCACAATGAAACAAGCTGGAGATTATGAACTAAAGATCAACCGTATGATCAAGAATTTCACTCTAAGTGTCTTTGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATCATGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATACCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTTCAGTTACAGACTCAGTCTCTCTGATAGCGTTGATCTCTGCTGCTGCTGCCGCTGGATCTCTGTTGATTGTTGCTGCAGTCGGGATCTTCTGCATCTGCAAGAAATTGGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCACCTCTGTCACACATGTGCAGACTGTTGTGGTCCTACTGAAGCTGTGATGCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTATCATTCTTCTGGTTTATGACATCAGATCCAGAAGAGCTGAACAAGATCAAGCACATATTTACACATCAGAGTCAGATCTGTACCTCATAAAGAGATTCACTGTTACTGGCACTGGTACTATGCAAGGATTACTCAGTTGTTTTGCTCCTTCTATTGTTGGTGGTGTTATTTTTATGCTGGTGACTGGAGGCATCAGGATACAGTACAATAATCAGGAGGATTATGTTGAAGCCTCACCCCCTAATCTGAGCAACACTTCATTGATGGCTTCTGCTGATGCGACGTCCCCTAATCGCACTTAGACTTGAGACTGAGACGTCGCTGTAATGATATTATCATTTTGAGACTTTCATTGAAGAGAAAATGGAACGAGACCAGACCAAGCTCACAGAGATGTGTACAAATAAGCAAATGAGCATTTGAAGGCAGCTGTCAATCAGCATTCAGGTACTTCAGGTTTTGTTGCTGTTACTGGAAAAAGCAGGTTTTGTCATGTTGCTAATGTTCTTTCCAGCATTTTTAACCTATTTACCAGCATGCCTATCTTGGTCACCCACTCATGCTGCAGCATGTAAATTCAAGTTGATAAAACACTCATTGATACTTTCTGTGATGTTTGGCAGGAGGAATGTTACAGCCTTTTTTTTTTTTTAACAGTCTTCATATATTTGTATCTTTGGTATACATTTTTATCTTTGGTGAAATATGCAAAAATGAATCACA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11114957_11124683.mRNA True 1857 mRNA 0.42 10 11114868 11125104

Neighbor

gene id symbol gene type direction distance location
CI01000030_11101642_11111505 NA coding upstream 1846 11100683 ~ 11113022 (+)
CI01000030_11074061_11090319 NA coding upstream 24392 11073685 ~ 11090476 (+)
CI01000030_11067119_11069478 NA coding upstream 45343 11067034 ~ 11069525 (+)
CI01000030_11047852_11057798 CHERP coding upstream 57070 11047762 ~ 11057798 (+)
CI01000030_11035570_11040272 RX1, RAX2 coding upstream 73635 11035257 ~ 11041233 (+)
CI01000030_11168935_11171909 NA coding downstream 43306 11168410 ~ 11172305 (+)
CI01000030_11184734_11195838 NA coding downstream 57602 11182706 ~ 11195865 (+)
CI01000030_11211094_11214554 NA coding downstream 84204 11209308 ~ 11214698 (+)
CI01000030_11278476_11281567 NA coding downstream 153292 11278396 ~ 11281743 (+)
CI01000030_11289568_11298414 NA coding downstream 162766 11287870 ~ 11298477 (+)
G162875 NA non-coding upstream 11217 11103337 ~ 11103651 (+)
G162762 NA non-coding upstream 22997 11053273 ~ 11091871 (+)
G162859 NA non-coding upstream 132489 10981498 ~ 10982379 (+)
G162855 NA non-coding upstream 139760 10974761 ~ 10975108 (+)
CI01000030_10911224_10918511 NA non-coding upstream 204305 10908366 ~ 10918929 (+)
G162892 NA non-coding downstream 90883 11215987 ~ 11234587 (+)
G162891 NA non-coding downstream 100556 11225660 ~ 11252096 (+)
G162893 NA non-coding downstream 109619 11234723 ~ 11236919 (+)
G162895 NA non-coding downstream 121564 11246668 ~ 11253729 (+)
G162912 NA non-coding downstream 135044 11260148 ~ 11292095 (+)
G162821 NA other upstream 246428 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 374317 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 613225 10471835 ~ 10511071 (+)
G162297 NA other upstream 893644 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 1068985 10039358 ~ 10047210 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 215651 11362114 ~ 11380772 (+)
G162951 NA other downstream 367497 11492601 ~ 11496119 (+)

Expression


Co-expression Network