CI01000030_11067119_11069478


Basic Information

Item Value
gene id CI01000030_11067119_11069478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11067034 ~ 11069525 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11067119_11069478.mRNA
AGATAAATATCACAGCTCAGTCGTGTTTCAGGTCAATGTTTTCAGACATTTTAAGAGTTATTATTGTGGGCTTTTCAGTGAACCGATGAAGAAAATGTTTCTCAAATTAGTTTTGCTCTGTTTCTGTTTGTGGCGTCTGGTTGGTGTGTCTGGTGATGATGAAGTGAAGTCAGTGTCTGTTCGGTCTGGAAATTTCGTCACTCTAAAATCTGGTCTTACCGAAATGAAGGATGATGATGTGATTCAGTGGAGGTTTGGAAATGAAAACTCTTTAATAGCTGAAATCAATAAACGGGCCGACAGAATCGCTGTATATGATGATGTTCCTGATGGGAGATTCTGGAACAGACTGAAGCTGGACAAACAAACTGGATCTCTGACCATCACAAACATCAGAACTGAACTCTCTGGACTTTATAAACTACAGATCAACAGTGTGATCAAGAGTTTCAGTCTCACTGTCATTGGATTATTAAGTTTTACACGTCCACGGAAGTCAGTGTCAGTGAAGGAGGGAGATTCAGTCATTTTCAGAATTGATTTTCTTAAAATTCTGGATAATGATGTGATTCAGTGGAGGTTTAAAAACACTTTAATAGCTGAAATCAATAAACGGACCGACAGAATCACTGTAAATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCAGAACTGAACATGCTGGAGTTTATCTACTACAGATCCACCATACGAGGGTTGATTTCTATCTCACTGTCTATAATGAAGTATCAGTGAAGAAGGGAGATTCAGTCACTCTAAACACTGGTCTCACTGAAATGAAGGATGATGATGTGATTCAGTGGAGGTTTGGATATAATAACACTTTAATAGCTGAAATCAATAAACGGTTCAACAGCATCACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAAACAAACTGGATCTCTGACCATCACAAACACCACAACTGAACATACTGGAGTTTATGAACTGAAGATCAACAGTGTGAGAAAGAGTTTTCTTCTCACTGTTTATTCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTTCAGACTCTGTCCACTGTTGTGGTCCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTCATTCTTCTGGTTTATGACATCAGATCCAGAAGAGCTGAACAAGATCAAGCACAGATTCACACATCAGGAAGTATTGAAATCTAAAGCAGAACGCTGAACTTTAAAGATTCTTCAAGTGTGTTTTTGTCATA

Function

NR:

description
Zgc:171887 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11067119_11069478.mRNA True 1584 mRNA 0.40 7 11067034 11069525

Neighbor

gene id symbol gene type direction distance location
CI01000030_11047852_11057798 CHERP coding upstream 9236 11047762 ~ 11057798 (+)
CI01000030_11035570_11040272 RX1, RAX2 coding upstream 25801 11035257 ~ 11041233 (+)
CI01000030_11017331_11024754 MATK coding upstream 41932 11017331 ~ 11025102 (+)
CI01000030_10993343_11015527 ZFR2 coding upstream 51179 10993343 ~ 11015855 (+)
CI01000030_10968005_10969830 NA coding upstream 96983 10967106 ~ 10970051 (+)
CI01000030_11074061_11090319 NA coding downstream 4160 11073685 ~ 11090476 (+)
CI01000030_11101642_11111505 NA coding downstream 31158 11100683 ~ 11113022 (+)
CI01000030_11114957_11124683 NA coding downstream 45343 11114868 ~ 11125104 (+)
CI01000030_11168935_11171909 NA coding downstream 98885 11168410 ~ 11172305 (+)
CI01000030_11184734_11195838 NA coding downstream 113181 11182706 ~ 11195865 (+)
G162859 NA non-coding upstream 84655 10981498 ~ 10982379 (+)
G162855 NA non-coding upstream 91926 10974761 ~ 10975108 (+)
CI01000030_10911224_10918511 NA non-coding upstream 156471 10908366 ~ 10918929 (+)
G162830 NA non-coding upstream 168586 10896840 ~ 10898448 (+)
G162827 NA non-coding upstream 184453 10882356 ~ 10882581 (+)
G162875 NA non-coding downstream 33812 11103337 ~ 11103651 (+)
G162892 NA non-coding downstream 146462 11215987 ~ 11234587 (+)
G162891 NA non-coding downstream 156135 11225660 ~ 11252096 (+)
G162893 NA non-coding downstream 165198 11234723 ~ 11236919 (+)
G162895 NA non-coding downstream 177143 11246668 ~ 11253729 (+)
G162821 NA other upstream 198594 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 326483 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 565391 10471835 ~ 10511071 (+)
G162297 NA other upstream 845810 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 1021151 10039358 ~ 10047210 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 271230 11362114 ~ 11380772 (+)
G162951 NA other downstream 423076 11492601 ~ 11496119 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location