CI01000030_11074061_11090319


Basic Information

Item Value
gene id CI01000030_11074061_11090319
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11073685 ~ 11090476 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11074061_11090319.mRNA
GTATAAATACAGCAGACTTACCTCTTACTTACGCAGACTTGCTTACCAAATACGCAAAACATTTACTTTATTTAATTATATGTAAATGTGAACTCATGAATATGATAAATGGGAGTGTGAATTGATATTTCCATTGGGTGTATTTTCAATTCACAATTTCAATTTGTGACTCACAGCATTTATAGCTGCTGTCTCGACTCTGGAAAGTTTATAAAAACATTTTGTGATATAGCCTATATTTTAATAATACACTTTACAAATTATATACTCAACAGATATGATTATTTAGCAGTTTTGTTTTTATTTCCAGACCATTAGTATGTAGTACTATATTCTGTCACCTTTGATTGGGTGGACCAGCACCACCCTGGCCCTTATGTGGCCTTGCCTCTGGTTTGAGTGTGACATTATTCTTGTTAGTGTGTTTGGAGTTAATGGTGTTTGGCCAGTGTCAGTAAACCAGGGAGATTCAGTCACTCTAAATCTTACTGAAATGCAGGATGATAATCAGATTCAGTGGAAGTTTGGATATAGAATCACTTTAATAGCTAAAATCGATAAACAGACCAACAGCTTCACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAAACAAACTGGATCTCTGACCATCACAAACATCACAATGAAACATGCTGGATATTATAAAGTTCTGACCAACAGTGCACAAAAGAGTTTCGACCTCACTGTTTGTGTAGTGAAAGAAATATCAGTAAAGAAGGGAGATTTTGTCACTCTACACAATGATCTTACTGAAATGAAGGATGATGATCGGATTCAGTGGAGTTTTGAATATGGACCTTTAATAGCTGAAATCAATAAATGGGCCAACAGAATCACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACTGGAACCACACACTCTGGAGTTTATGAACTAGACATCAACTACATGAAGATGATTTTCATTCTTAATGTTGACGACTCTGTCCACTGTTGTGGTTCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTCATTCTTGTGGTTTATGACATCAGATCCAGAAGAGCTGAACGAGATCAAGAACAGATTCACACATCAGGTGTGTTTGGTGATGATGAAGTGTCAGTGATAGAGGGAAATTCAGTCACTTTAAACTCTGGTCTTACTGAAATGAAGGATGGTGATGAGATTCGGTGGAAGTTTGGAAATGAAAACATTGTAATAGCTGAAATCAATGTAACAGCCGACAGCTTCACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCACAATGAAACAGACTGGACTTTATAAACTACAAAACAACAGTCTGATCAAGAGTTTCGGTCTTACTGTCTTTGGACTGAGGTTTGTGACAGTGATTGAGAGAGATTCAGTTACTCTAAACTCTGATCTTACTGAAATGAAGGATGAAATGATTCAATGGAGGTTTGGAAACACTGTAATAGCTGAAATCAATAAACGAGCCGACAGCTTCACTGTATATGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCAGAACTGAACATGCTGGAGTTTATGAGCAACAGATCAACCATTTGAAGACATTTTTCATTCTCACTGTCATTTATGTGATTGGTGATACAAAGGTAATTGGATGTTTGGAACTGAAAACACTAATCGCTGAAATCAGTGTAATGGCCGAAATCATCCCTGTATATGATGATTACGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCACAACTGAACATTCTGGACTCTATAAAGTAAAGATAATCAGAAATATAGTCAAGCTTTTCAATCTCGCTGTCTGTGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCACCTCTGTCACACATGTGCAGACTCCGTCCACTGTTGTGGTCCTACTGAAGCTGTGATCCGATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTCATTCTTGTGGTTTATGACATCAGATCCAGAAGAGCTGAACAAGATCAAGCACAGATTCACACATCAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGATATCACTCACCTGTCACACATTTTCAGTGACGGCGAAAGGAAGCTTTGCTCACCAATGCTCTCTTCTGAAGTGGAGTGGAAAAGCGTCGTTACCAGAATCTGGTGTATTGAGGCCATCTAGTGGCCAAAACAGTCAATATGCTTTAATATCTCATGTTATTCTTTAATACCATCCTTTTTTTTTCTGTATTAATTTTTTTTTTTTTTTTACTTTTTTTCATTTTTTTTCATAAATGTATGCAGCAACCCTGCAAATATAAATGTAAAAATTATTTGTA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11074061_11090319.mRNA True 2888 mRNA 0.39 12 11073685 11090476

Neighbor

gene id symbol gene type direction distance location
CI01000030_11067119_11069478 NA coding upstream 4160 11067034 ~ 11069525 (+)
CI01000030_11047852_11057798 CHERP coding upstream 15887 11047762 ~ 11057798 (+)
CI01000030_11035570_11040272 RX1, RAX2 coding upstream 32452 11035257 ~ 11041233 (+)
CI01000030_11017331_11024754 MATK coding upstream 48583 11017331 ~ 11025102 (+)
CI01000030_10993343_11015527 ZFR2 coding upstream 57830 10993343 ~ 11015855 (+)
CI01000030_11101642_11111505 NA coding downstream 10207 11100683 ~ 11113022 (+)
CI01000030_11114957_11124683 NA coding downstream 24392 11114868 ~ 11125104 (+)
CI01000030_11168935_11171909 NA coding downstream 77934 11168410 ~ 11172305 (+)
CI01000030_11184734_11195838 NA coding downstream 92230 11182706 ~ 11195865 (+)
CI01000030_11211094_11214554 NA coding downstream 118832 11209308 ~ 11214698 (+)
G162859 NA non-coding upstream 91306 10981498 ~ 10982379 (+)
G162855 NA non-coding upstream 98577 10974761 ~ 10975108 (+)
CI01000030_10911224_10918511 NA non-coding upstream 163122 10908366 ~ 10918929 (+)
G162830 NA non-coding upstream 175237 10896840 ~ 10898448 (+)
G162827 NA non-coding upstream 191104 10882356 ~ 10882581 (+)
G162875 NA non-coding downstream 12861 11103337 ~ 11103651 (+)
G162892 NA non-coding downstream 125511 11215987 ~ 11234587 (+)
G162891 NA non-coding downstream 135184 11225660 ~ 11252096 (+)
G162893 NA non-coding downstream 144247 11234723 ~ 11236919 (+)
G162895 NA non-coding downstream 156192 11246668 ~ 11253729 (+)
G162821 NA other upstream 205245 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 333134 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 572042 10471835 ~ 10511071 (+)
G162297 NA other upstream 852461 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 1027802 10039358 ~ 10047210 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 250279 11362114 ~ 11380772 (+)
G162951 NA other downstream 402125 11492601 ~ 11496119 (+)

Expression


Co-expression Network