CI01000030_11017331_11024754 (MATK)


Basic Information

Item Value
gene id CI01000030_11017331_11024754
gene name MATK
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11017331 ~ 11025102 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11017331_11024754.mRNA
ATGGGGTGGAAAAACACGTCAGAGCCGCGACATGCATATCAGGAGGAAGTGAGGAAGAACTGGACGGCAGGTACGCAGTGCGTCGCCAAAAAAGAGCACTGCAAACCTAAAGCTGGGGAAATACCGTATCACAAAGGCGACATCTTGACTCTCGTGGGGCCTGGAACGAGAAAAGGAGAATACAGAGCCAGACATAACACAACAGGAGACGAAGGGCTGGTTTCGGGTTCAAACTTCAGAGAAAGGGAAGCCCTCCGTATAGACCCAAAATTGAGCCTCATGCCATGGTTTCACGGCAAGATATCAGGACTGCAAGCCGTCTGCAAACTCAAGCCCATAGACGACGGGCTTTTCTTGGTGCGAGAGTCCGTTCGGCACCCCGGCGATTTTGTGCTGTGCGTCTGCTTTCACCAGAAGGTCTTCCAGTACCGGGTCATCTTCCAAAACAACAAACTGACCATCGACAACAAGGAGTTCTTCTACAACCTCATCGACATGATAGAGTTTTACAGCAGAAATCAAGGCGCCATCGCTACTGTTCTGCTGAAGCCCAAGAAGAAGGAAGGAACTAAATCTGCCGAGACGAAGCTGTTGAAATCCGGCTGGCTTCTGGATCTCTCAAAGCTGACGTTAGGAGAGGTCATTGGAGAGGGCGAGTTCGGGGATGTTTGTGAAGGTATGGAGCACCTGGAGTCAAAGAAGCTCCTGCACCGAGACCTCGCCGGCCGCAACATCCTCGTGTCGGAGGACGGCGTCGCCAAAATCAGCGATTTCGGTCTGGCCAAGGTCAGTTCAACGGCAACCGACAACTCAAAGTTACCCATCAAGTGGACGGCACCCGAAGCCCTAAAGAGCAAGAAGTTCTCCACTCAGTCAGACGTGTGGAGTTATGGAGTGCTTCTGTGGGAGATCTTCTCCTTCGGCCGACAGCCGTATCCCAAGATGTCGGTGAGTGATGTGAGGGAGTACGTGGATCAGGGATACCGCATGGAGCCGCCGGACGAATGTCCCCCTGACGTCTACGCCATCATGATGTCCTGCTGGGAGATGGACCCCAAGAAGAGACCGTCCTTCCACAAACTCAGAGACAGACTGGAGAAAGAGCTGAGCAAACATTGTTGAGTGGATCTCCGGCAGGTTTTCACCATGTGTATAATGTAGATTTAATTTATTATTGATCACACTTTATATTTATGTGTCTATTTTGATTTAGTTTTTTTGATTGAGTGAGGGATTTCACCTCGAAATCATAAGATGAACTAAACTTTTGCAGTAAATCGAAGCCTATTTTAAGCCTTTTTTTCCCCATTGTATTTGCATGACAGTTAAAAACATTAAATCCGTCCTTGGAAGTTGTAGTTAATTATTCTCAAAAGTGGTTTCTATTACAGTAATATTACTGATTTAGTTTTTTATATTTTTTATTAATAGACTGTAATGCAGATTTTATTTGATTTAAAATAGTATAAA

Function

symbol description
matk Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MATK (megakaryocyte-associated tyrosine kinase).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0042127 regulation of cell population proliferation biological_process

KEGG:

id description
K08888 MATK; megakaryocyte-associated tyrosine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11017331_11024754.mRNA True 1470 mRNA 0.47 9 11017331 11025102

Neighbor

gene id symbol gene type direction distance location
CI01000030_10993343_11015527 ZFR2 coding upstream 1476 10993343 ~ 11015855 (+)
CI01000030_10968005_10969830 NA coding upstream 47280 10967106 ~ 10970051 (+)
CI01000030_10958494_10960930 TNFAIP8L1 coding upstream 55127 10957157 ~ 10962204 (+)
CI01000030_10936461_10939911 NA coding upstream 76541 10936461 ~ 10940790 (+)
CI01000030_10911224_10918511 NA coding upstream 98402 10908366 ~ 10918929 (+)
CI01000030_11035570_11040272 RX1, RAX2 coding downstream 10155 11035257 ~ 11041233 (+)
CI01000030_11047852_11057798 CHERP coding downstream 22660 11047762 ~ 11057798 (+)
CI01000030_11067119_11069478 NA coding downstream 41932 11067034 ~ 11069525 (+)
CI01000030_11074061_11090319 NA coding downstream 48583 11073685 ~ 11090476 (+)
CI01000030_11101642_11111505 NA coding downstream 75581 11100683 ~ 11113022 (+)
G162859 NA non-coding upstream 34952 10981498 ~ 10982379 (+)
G162855 NA non-coding upstream 42223 10974761 ~ 10975108 (+)
G162830 NA non-coding upstream 118883 10896840 ~ 10898448 (+)
G162827 NA non-coding upstream 134750 10882356 ~ 10882581 (+)
G162762 NA non-coding downstream 28171 11053273 ~ 11091871 (+)
G162875 NA non-coding downstream 78235 11103337 ~ 11103651 (+)
G162892 NA non-coding downstream 190885 11215987 ~ 11234587 (+)
G162891 NA non-coding downstream 200558 11225660 ~ 11252096 (+)
G162893 NA non-coding downstream 209621 11234723 ~ 11236919 (+)
G162821 NA other upstream 148891 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 276780 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 515688 10471835 ~ 10511071 (+)
G162297 NA other upstream 796107 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 971448 10039358 ~ 10047210 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 315653 11362114 ~ 11380772 (+)
G162951 NA other downstream 467499 11492601 ~ 11496119 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location