G160215


Basic Information

Item Value
gene id G160215
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3429257 ~ 3440239 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU181893
TGTATTAACCTTAATTATATATATATATAAAAATGAAATAATCAATTACATATTATTTATATATGATTTATTTTAAAAATATACTTATAGTGTTAGTATGATTTTTACATCAAAAATTGTCATAATTTAGAAATAAAAAGCGTTTTTCCTACCCTCATTTTATTCCTCTGAACGATCTATTTTAAGGGGCGTATCTGCTCTGAGACTTCAGTGTAAACGCCCACTGCTGTGATTGGCTAACATCTTTGAATGCGTTCTTTGATCGCTCTCTATATACATTTTAATGACGGTTTAAATAACAGATTATTTTCATCCTACTAAGAGAAACAATGTGAAGTTGACCATTTAGATTAGTTTGATTTACTGACACATAGACAAAGAACATCTGACTGTACATGAATCATTACATCATTACAGGCATTAGAATGAACACAGTTACTTACATGTTGTCGCATTACTGTTGAGTCCATATTGTGAAAGTCTGTTTGAAAAGCCTGTGCTGAAACTGATTTACCAAAGAATCCACAGTGAAATGTACCAAATACAAATAAATAAAGCTCAACTGAGACATTCAGATTGTTGAAAATAAATAACCATATTCCTAGCATTAGGATCCAGTGGGTGGGACTAACGTTGCAATGATGAAGTAGGCGTTAATTTTCTTCTGCAGAGGTGGTCATAGGCACATTCCGCAACAATTTGTTATCTGGGCTTGGTTACAATAAAAGCTGTTTTTGGACTAACAAGGAAGTTTTCAGTTCTGAAACTTACAGGATATTCTTATAGTATGATGACCTCTTACATGTCAAAAGCTCAAGGAAAATTTGATTTCTCAGTTCAACATTTTTTAACACATTTTTTGTTCAATTATACTTTATGCTAAATGTAGTAGTGCATAAGTTGTAACAGTCCCTATTTGCTTAGTATGTTAAGAGACAGTTTTTGCAAATGCAAATCACTTATTGCAAGAACCCTGACAAAATGTCAATCGTGTCTAAATTTAACTACATCCCACGCTTTTTGCAAACTCTACTCATCTTCTGTTTTAACAGCTACTACCTTGAGGAGTTGTGTTTTCTCAATCTCAACCTGCAAACTGAAATAACAATTTCCTTTTATATCTGCCAGGCTTGATGTTCCATGTCCTCCTTTCCTCCTCATTTACTGTAACCCATCTTGTCATTTATTTTCCTAACAAATTGCTGTGCATAACCCAGAGGCGTTGTCGGTAAATATTTTGAGGCATAGCTGGATTGGCTGGCACAAAGACTTTATATGCTGCAATGTGTGAAAGTATCTGGATTCTCTGCCCATCTGGAAATAAACAAGCACTTTGAATCCCCCTCCCAAACCAGGTTAGGGTTAGTCATCTGGCACTATCTTAAAGGAAGAGCAATGATGTAACCCTTCAAGAGACCCTTCGTATAATTTTTTTTTTTAACGAAAACACTTTTACTTTATATATATTACTTTAATATATATATATATATATATATATATATATATAATATGCACATATTTTTTCTATTATTATACATCTATTATGTATAATTTTTGGAGTTTTTTATTGTTATTTTTTACTTTTTTTGACGCAACAGAATCGACAAATGCTTTCTGTGGCCCATGTAGATATCAAACAAGACATATCTTGTTTTATTCACTATGAAATCCTCAAACACACTACTGACTTCCCTCATCCTACCTCTTCTGTTGTACCATGCATTTGCAGTGCAGGAAACAGCATTTCCCGACTAGCTGTCTTTGTTTAATAGAAAGATTGAGCTGCATCGGAGTAGACAAGAAGGCTTTGTCAACTTTTTCTCTCCGCTCCTGTTCCCTTGTTACATTAGCGCGTTCAATGTCAAGTTTGTCAGCCGGGACACTACGAGCCACTGCGTGTGGGTGATAACGGAGTAACTAGAGAAGACCGGCAGTTTAATCATGACTCCGTTCTCAAACCTGGCCAGACTCGAAATGGAATGGAATCTGGAGGAATGCTGGCATTCTTGGCTGCCTCAGCCCTTCGCTTCTCGAGGCGACAGATGGAGCGGGCGTATTAAGGCGCCCCAGGTCGACCCCGGGTGCCCAATGGTAGGCCAGGTTCAGCAGGAGCAGGTGGGCATCTGCTCTACGTCCGTAATCGGGCCGAGCCACATGACTCTTAGGCTGTGCGCTTGGCCTGCCCGGGCATTTGTACTCTCTTGATCTCCAGGGTCCTTGATGGCTTTGACCCCCACACCCAGATTGGGCAAGTTAGGTGGATCCTCTAACTTGTTTAGCGAGGAGGTCAGATTCGGTGAAAGCTGGAAGGTAAACCACTCTTGCCCACTAACCAGACAGGAAATAGATTTAAGCATGTGCCATGCAGAGACAATTTGGTAGATTGGTTTAAAATGTCAAGCCGAGCAGCTACACTGTGAATTAAGTTATCTGGGTGCATTGGGAATCCGTAAGTGTGTTTGTGCAAGCCTATGTGTACACGGGCACCGCAAATCACATTTTCTTCCAAATACGTCTGTGCATGGGCAACAATGCACCCTGGGCCATATTAAAAAAGTGAAAAGAAATCAGCCTTCCATATTCGCATCCCAACTTTAACAAGACTTTGAATCGCATTTTTCAGCCATAGAGTTAAACTGCCCCGGACAGCAGCTGCCGTGTTAAGGTACTGATAGCGATTCATAGGCTCTGGCTTTAAATATTGAGCAGGCTTGGTGCTGAAAAGCAAGCCTCGGTAAATATGATTGGCAGAGGTGTTTTCAAAGCCGGGCTAATTCCATTAAGCTATTGATCTCCCATCGCTCCTTGCTGCCGCTCTTCTCTCTGCCTGCCTGCCTGCCCTACCAATGTTTACTCCGGCAAGAGGAGCAGACTGAGCCCCGCCCTTGGACCCTGCTGGTTCTTTCATGATGGATATTAAGTTTTCAGAAATTTCAGAGTGTGATGTCGGTGTGGAGCCGGTAAACAAACCGGCTGCAAGATTTAGCCGACTTAATGAGATATATAATGACTTATATAGATATAGATATATGTAGATGTGTAGACGGATAGATAGATAGTTGGATGGATAGTAGGGCTGGGTAGTGACACAATTTTCACGATTCGATTCGATTACGATTTTGATTCGATACTATATCGATTATTTTGGATGTAGTATTTCAGTTACAGTACATGGGGAAAAAAATCAACTAATGCTGTAAACTACACATGTAAGTCAGTTGGTACTACTATAATAATATTGAAGGTTAAATTAATTTATTTATATACAAACACTTAAATTACACTCAATGATGTTTTTATTATAAATAAAGTCTAGAATTACATAATCATATTAATACTCCAATTAGTTTTTTTGAAATATAAACATTTAAATCACGGCTGTCATAACTAATTTATTCAAACATGCATTAAATATTGAAGAACATTAAAAATTATAATGAATATGTAACGGTGCATAGCTATATTTATCAGAATGTTGCTTTCTAGAGTACACTTTTTTAGCTGACTAATGGGTTTATGGTCACTGAATTTGTTTTTCTGAAGTAAATGTAACGTTACGTGACATTGTTTACAAGCTGTTTTATTGACGTCTTTCCGAGGTTGAAACACTGATTGAGCTATTACACGAGACATGATACGGATTTCAGTAAGTTGTACTGTATATTTTAACATACCTTCAGATGTTTAGTCATGTTTATTTCACACTGTAACTGATATTAAAGCGGAGGAGAGGATGTTCACATGCTTAACTTCTCCTTAACTGAGGCGGTAAAGCGATCTGTCACGTCACATTAAACAGCGCCAAAACGGTATTTATTTTTTTGAATCTCATAATAGGATGGACGTCATATGAAATCTGAGACTTTCATATCAATAGTAACAAAGCACAAAGATTATTGCGATTATTGGATGTGAGGCGCGCTACATGTTCTGCTCATTCATCAACTGAAAACAGACTAGACTAATCGATTCTTGGGATTTAAGAATCGATATCGGTTCGTAAAAATAAGAATCGATTAAAATCGAGAAATCATTATTTTTTACCCAGCCCTAATGGATAGACTGAGGGACAGATAAGTAGATTGACATATAGACAGGGGAACAGATGGAAATGTAGATGTCTAGATAAACAGATAGATAGATAGATAGATAGATGGATAGATGGAATGATTAAAGGTTGTGTTAGTAGTCAATCTCCAGATCAAACATGTAGGTTAATACTAATGTCGTGCACGGCTGCACTCATACATCACATGCAAGAGTACACACGCTTTCTCCCAGCCATCATCATTTGCAGAACTCTGGTATTTTATCCTGATTGCACTTACATCAGTAATAGTGTGTACATGACCCTCCGTTCTCATGGGGGGAGACTTCATTACAAAAAAAGAACTTCATAAAAAGGAAAAAAGAATGAAAAAGCTTGTCTTGCACTCTCTGCCTCAACTTTCAGTCTGATGTGCAAGAAATGCAACTGGCCACGTGTAACAACAAGGAGGCATTGAGATTCATACTCTGTTCTCTAAGTAAACACTGCTGGAGGAATTGAAAAGATAGGCGGAAAGTGACTTTATTGATGATTATGATCTTAGATAGGCCTGTGTTTTACTTCAGTTTAGCACATCTTGGTTCCTTAGACAAGCACATTTTACATCTTAAAGTTGAAATATGTCATTTTTGCGCACCTGTCATCTGATTTACCACGGCGAACGTGATTTCACCAAGTATAACATGTTCCTTGATCAACATCTTTGTTAATCTTGGAACAACATTCCAATCAGCCAATCAGATTTGAGGGACAAGTCTACAGTTTATGTCAAGATTAGGCTCAAAGCCAGGGTTAGGTGCTTCTACATCACTGTTATACACCTCTTATTTCCCTCTGATTTTAGGGATAAGATATTGGTAGGGATAGGGTTAGGACTAAAATATTCAGACAGGAATGTTGTACCAGGATCAACAAAATATGTTGATCCAGGAACATGTCTTACTTGGCAAAATCACGGTGACCGAATTCCCACATAGTCCCCTTCATCTTCCATTGAAACAGATCCAAAGTCAAAGCTACATCTTGTCCTGTCCATCAGCTTCCTTAACAACAGCGCATTTCCTTCGCATTCTCCCTCAAAGGTAACGAAGCGAACAAAGGGTCTCCGCCATTGCTCTTAAACAGGGAGCCCGGTTCGTCAGCAGTTTAACGGCTGATTGATGACACAGAAGTGAGGATGATTGTGGGCTAGCCAGCTCCGAGTGACAAGCAATTATTCAGTTCAAGTAATGAAAACCTTAACACCAATCATTGGGGCCTTTACACTATGCTAATGCCTTATGCAATATTATGCATTCTCTCCCATCAACTGCCACATCCCACGGGTGTCGGTTTAGACGTTTGCTAAATAACATCATTTGTAATATGCAATTGCGATGGTGAAGCAAGAGAGCTCATAAGGCGAAGATGCTGTACAAGTTTTTAGGGCATGAGCACGCTAGAGGAAGCTCAAAGTGTTTTTCGGATAGTGCTGTTTAATGTGCGCTTTTGAGACCGTGGAAAGAGCTGGGTCGGTTTGAAATCAAACAAAATCAACTAATTGGATCTCCAAAAGCATAACTGGACTGTAACCATCTATCAATTCTAACTACATTCATCTATCTTATCAGTTAAGTTGCACTTTTGAAAAACTGGTTAGCTACACTACAAGCTAAAATTTGCGCTACATACTAAGCTATGATCAATGAATAATAATTGGGTAGTTACAAATTTTAAAAAATCTTTATTTATGTATTTATTTATTTAATTATTTATTTATAACTACAGCATTTATTATTATTATTATTATTATTACTATTGTTGTTGTTTATATTATTTAAATTATTATTTATAAACATTTTCTAAAAAACGCACTATCATCACGCTACTAAAAATAGTAATTTTATTGTTTTATATTAATATTATGATTATTATTATTACTAAACAATTTGAAAATAGTTGAAAATAGATGCACTTATTAATTAATTAAATAATTTATTTATAACAATATTTATTGTTGTTTTATTATTATTATTTATAATACAATTATTATTATTATTTTGAAACTGTTGAAAATAGCTGCACTAATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181893 True 6119 lncRNA 0.37 3 3429257 3440239

Neighbor

gene id symbol gene type direction distance location
CI01000030_03273527_03314595 CELF5, CELF5A coding downstream 114662 3273527 ~ 3314595 (-)
CI01000030_03213584_03216600 C10H19ORF70 coding downstream 212657 3213111 ~ 3216600 (-)
CI01000030_02978356_03013342 POLRMT coding downstream 415750 2977774 ~ 3013507 (-)
CI01000030_02824217_02832330 ATP5D coding downstream 596045 2823974 ~ 2833212 (-)
CI01000030_02785349_02803666 MIDN coding downstream 625591 2783629 ~ 2803666 (-)
CI01000030_03491770_03493119 CELF5A coding upstream 49880 3490119 ~ 3493741 (-)
CI01000030_03545674_03546876 RXFP3.2B coding upstream 104903 3545142 ~ 3547053 (-)
CI01000030_03551269_03557640 CREB3L3A coding upstream 110635 3550874 ~ 3558196 (-)
CI01000030_03571883_03576733 BTBD1, BTBD2, BTBD2.S, BTBD2A coding upstream 130786 3571025 ~ 3576907 (-)
CI01000030_03632671_03646877 NA coding upstream 192233 3632472 ~ 3646877 (-)
G160218 NA non-coding downstream 2847 3420976 ~ 3426410 (-)
G160210 NA non-coding downstream 30247 3374499 ~ 3399010 (-)
G160212 NA non-coding downstream 55022 3369356 ~ 3374235 (-)
G159218 NA non-coding downstream 208261 3220401 ~ 3220996 (-)
G159202 NA non-coding downstream 279707 3149336 ~ 3149550 (-)
G160211 NA non-coding upstream 1560 3441799 ~ 3452621 (-)
G160208 NA non-coding upstream 12971 3453210 ~ 3462196 (-)
G160238 NA non-coding upstream 61741 3501980 ~ 3502415 (-)
G160239 NA non-coding upstream 62272 3502511 ~ 3502887 (-)
G160245 NA non-coding upstream 68591 3508830 ~ 3509087 (-)
G158980 NA other downstream 896693 2499584 ~ 2536375 (-)
G158914 NA other downstream 977539 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 1269966 2155584 ~ 2157390 (-)
G158780 NA other downstream 1507126 1920258 ~ 1922131 (-)
G160213 NA other upstream 26114 3466353 ~ 3469162 (-)
G160713 NA other upstream 1978880 5419119 ~ 5423513 (-)
G160712 NA other upstream 2016721 5456960 ~ 5512074 (-)
G160949 NA other upstream 2357058 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 2693136 6131090 ~ 6138406 (-)

Expression


Co-expression Network