CI01000030_03632671_03646877


Basic Information

Item Value
gene id CI01000030_03632671_03646877
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3632472 ~ 3646877 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03632671_03646877.mRNA
ATGGCAACCACAGAGCTCTACACAAAGGGTGCATGTGTGTGGGTGCCAGACCCAGAAGCTGTGTGGGTGTCTGCACAGCTGCTTCATGACTACCATCCTGGAGACCAACAGATCTTAATCCAACTCAGTGATGGCAGAGGGGAGAATGACCTCACGGCTCTAACCTTCCTCCATGAGCCAGCGGTACTTCACAACTTGCGCGTGCGCTTTCTCGACTACAGTAGCATTTACACCTACTGCGGGATTGTGTTGGTGGCATTAAATCCATATGAACAGTTACCAATCTACGGAGAGGAAGTGATTGACGCTTACAGTGGCCAGGACATAGCTGATATGGAGCCGCATATTTTTTCTGTGGCTGAAGAGGCGTACTGCACTATGACCAGAGAGGAGAAAAACCAATCCATCATAATCAGTGGAGAATCAGGCTCAGGTAAAACTGTATCTGCTAAGTACACCATGCGTTACTTTGCTGTTGTGGGGGGTGCGGCCCAGCAGACCAGTGTGGAGGAGAAAGTTTTGGCATCCAATCCCATCATGGAGGCAATCGGTAATGCAAAAACAACCAGAAACGACAACAGCAGCCGTTTTGGGAAGTATATTGAGATAGGATTTGGTCGTAAAGGGGATATAATTGGGGCAAACATGAGGACCTACTTGTTGGAGAAATCAAGAGTTGTTTTTCAGGCAGCTGAAGAGAGAAACTACCACATCTTCTACCAGCTTTGTGCTTCCAGGGATTTGCCAGAGTTGAGGACACTTAAACTTGATTCTGTGGAGAACTTCCATTACACCAACCAAGGGCAAGATGTGCACATTTCAGGCACAGATGATGTTGTCGAGCTGGAGCGGACAAGAAATGCCTTTACTATACTTGGAGTGCAACCGGACCAGCAGATGGAGCTATTTCGTATACTGGCAGCTATTCTTCATCTGGGGAATGTCAACATACAAGCCAGTGGTCGTGGTGGGGACCGCAGCTACATTGATGTACAAACACCATTTCCTATTATTGCGTACATTTCAGAAAAAAACCGAGCCAATGACCGTTCCTTGGCTCTCTTTGCCAAGCTTTTGGGAGTGGAAGGTGCTCAGATGGCCCAATGGCTATGTCACAGGCGACTAACGGTGGGTGGGGAGATGCTTGTGAAGCCCATGACAGGCCAGCAGGCTAATGAAGCACGGGATGCTCTGGCTAAGCATGTGTACGAGCAACTATTCACATGGACGGTGCAGAGACTCAACTCATCCTTACGAGCACACAGGGAACAGCCCAAATCTTTCATAGGAGTTCTTGATATCTATGGGTTTGAGACTTTTGACAGGAATAGCTTTGAGCAATTCTGTATTAACTACGCCAACGAGAAACTCCAACAGCAGTTCAACAGGCATGTGTTTCAGTTGGAGCAAGAGGAGTACCTGCGAGAGGAACTTCCCTGGAACCGTATTGAGTTCAGCGATAACCAGCCATGCATTGCGCTCATCGAAGGCCAGTTGGGCCTTCTTGATCTTCTGGATGAGGAATGCAGAATGCCGAAAGGCTCAGATGAGAACTGGGCTCGGAAGGTTTACGACCAGCACCTGAATCACAGCCCCCACTTTTGTAAACCGCGCATGTCCAACTCTGCCTTCATCATTGTGCATTTTGCTGATATGGTTCAGTACGAGTGTGACGGCTTTTTAGACAAGAACCGAGACACTGTGTTTGAGGAGCCCATCAATATACTGAGAGCTAGCCAGTCAGAACTAGTTGCAGAGTTGTTCCAGAAGGAGTCAGCAGGGGGATCCCTCTCCAACTCCTCTCTTGCAAACGGGAGCGTACGTTCAGGAAAAAGAGCTCACAGAGAGCACAAATTAACTGTGGGCTTTCAGTTTCGTCAATCCCTGCACCTTTTGATGGACACCTTGAACAGCACCACCCCACATTATGTCCGTTGCATAAAGTCCAATGACCTCAAACAGCCTTTTCTGTGGACGTACGAGGAATTCTTCACCCGCTACCGGGTGCTGCTACGTGGTTCTGTTTCTCAGGATGATGTACGGCGTTCCTGCCGGAGTGCCCTGCCCGACCTTATCCCTGATCCGGAGCAGTACTGTTTTGGCAAGACTAAGGTCTTCTTCCGGGCCGGACAAGTTGCAGTACTGGAGAAGCTGAGAGGAGATCGGCTATGTGCAGCAGCGGTTTTGATCCAAAGCTTGGTGAGAGGATGGCTGCAGCATAGGCGTTATCAGCGGCTCCGGTGGGCCACCTTCATCCTGCAGCGATACACCAGAGGAACCCTAGCCCGAAGGTTGGCGTGGACCCTCCGTTATACACATGCTGCTTTAATCATCCAGAAAACATACCGCATGCTGGCTGTTCGACAGCTGTATATGACCATAAGAGAGGCCACCATCAAAATCCAGGCTTTCATCAGAGGAACCCAGGCTCGTCGCATTTATAGACAGATGCTGACGGAGCGGGCAGTGGTGTTTTTGCAGGCACAGGTGCGAGGTTGGCTGGCCCGGTGCAGTTTCAGGCGCGTCAAAAGTGCAGTGGTGCTTCTGCAGTGTTGCGTGCGCAGGCGAGCGGCACGTAAAGAGCTGTTGCACCTGCGTGCTGAGGCTCGCTCGGTAGAGAAATACAGAGAACTCAATAAAGGCATGGAAGTCAAACTCATGCAGCTGCAGCTCAAAGCCGACCAACAGGCGAGAGAGAGTGCGTCTCTGAGGGAGACTCTTCAGGCCGAGCGAGAAGCTCACAGCTCTGAGCTGGAACAGCTGCGGTCCAGCCTCCTCAAACTCCAGATCCAACTGCAGGAGAATGCAAACAATGCTCCTTTACTCGCAGACAAACAGGAGGAGGACAGGAGGAAAGCTGAGGAGAAGGTCGCCCAAGAGATTCTCCAGCTTACACAGGAAATCCAAGCTCTCCGAATTGAGAGAGATACTTTGGAGAAAGAGAAGGATGATTTGGCTATTCGTTTACAGGATCAAGAAAAAGCTCAGGAGGAGAGCCGCCAGCAGTCTGTGGATCAGGCAGATGCATCAGTGCGAGCAGAGCTGGAAGAGGAGAGGAGGAGATACCAGAGTTTACTTAGAGAGTTCACGAGACTAGAGCAAAGATACGAAAACCTAAGAGATATGAGCCTATTCGCCACCAATGAGCATTCACGTGGACATAGGCGAACAGATTCGACTGTGTCTTTGGAGACTCTGTCGCCCGTCACCACGCCGTTCTCGAACTCGCCCGTCTTCCCTTCACCCGAAGAGGTCAGGAGGATCAGCGTCACGTCACCCACCGACAGGAGACCCTGGAGTCATGAGCAACCTCTGAACATCCTAATGGAGGATATGAGCGTTGCGAAGGACACAGCCGAGAGGATGAAGGGCGAGGATCTCAGATATGCTTACGACGCTGTACGGGTGGCCAACAAGTTTCTAGAGACGCAGCTGTTGTCTCAGAGAGCGCAGTGGGAGCAGGAGATCGCAGCTCTCAGGATGAAACTCCAGCAGGCCCATGACAGAGATACACCTGCAGATCCTGAGATAAATGTACCCGTTCCATCTAAACCTACCGTTTATTGTTCTTTGTACTTTGTTCAGTTGTCATTGTTTGCTTCTTTATGTATGTGTATGAAGGAACTAATGGAGCAGGTGGCGGTTCGAGAGCAGGAATGTGTCCGATTACGTCGAGAGCTCAAGGAACTGAAACACACCGTCACCCTCAGGAGAATCCTGTCTTATGCAGGTCTAGCCATAGCTGCGTCTCAGGACCCAACATCTCCTGCCCCTCAGAAGAGCCAGACACTCAGCGGATTACTGGAGTGCAGGAAAAGAGATGAGAGCAAACTGATCAAACACCTTATAACAGATGTGAGGGCGGAGGGCGTTTTGTCATTGTCCCCTGGACTGGCGGCTCGGGTTCTGTTTCTGTGCGTACGCCAGGCGGACTGTAGCGGCGAACGGACACGGGTGAACGGGCTCTGCAGCGCTGCTGTTAGCGCTATTAAAACTGCCATGAAGAAACACGGCAATGATCTGGACACGACAGCTGCGTGGCTAAAGAACGCTTACCTGCTCAAAGACCTGCTCAACCAGCACTCTCCCCAACAGGATGTGAGGGGCTGCGAAGAGCTGGTGCCTCTGGTGACGGATGTGCAGGAGTCTGTCCGAGCGCTCAGTGATCTGTGTATTCAGGCCTATCAGCAACTTCTGTCCATCTCTGAGAGCCATCTACAACCTATGATTGTCCCAGCAATGCTTGAAAGTGAGACCATCCCTGGTCTGGCTAGTTCATCTGTAAAGCTGAGTGGCGGTCGCAAGCGCGCGGGTTCGGACCCCCGGCCTCCTGCCAGTACAGAGGGGACCACTATGTCTGCAGTCTTGAGGGAACTGTCAGCGCTGCACACAGCCCTGTCCCGTCAGGATCTACCCTCGGCCCTGCTGGAACAAGCTTTCCATCAGCTCATGTACCTGCTGGCCGCCACCACCCTCAACAGCCTAATGCTGCGTAAGGACATGTGCTGCTGGAACCGCGGCCTTCAGATCAGGTATAATGTGAGTTTACTGGAGGAGTGGCTGCGGAGTCGTTCACTGCAGACAGGGGGCGCTGTGACCGCTCTGGAGCCTCTGATACAGGCAGCACAGCTTCTTCAAATGAGCAAGAAGACTGAAGCAGATGGACAAGCCATGGTCCAAACCTGCAATGCATTGTCCAACCAGCAGGGGCTGCTGAAGGGGCGCTCTGAGGGGCAACCTCCACAGCTTCTGATGGATGTCAGACGGGTATTCCCCGTCACGTTCCCTTATCAGCCTCCACCACAAGTCAGTGCCGCCCAACTCGAAATCCCAGAGTCCCTCAAGATCTCCTTCCTACGCAGAGTTTGAATGTGGGTGTTCCTTTACCTCCTGAAATGCATTTATTTTTGCTTTTGTTGCCTTAACAACGTCACTTTAAAATGCTGTCTGAGCATTTTGTATACATTATGTTAGCATGCTATTTTGGGCCCATTGTAAATGTTTAATTATGTTAGCTTGACAAAGCCAACATATTAGCCATTCCTCCCTCTTTACGTTAAAAAATAAA

Function

GO:

id name namespace
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03632671_03646877.mRNA True 5068 mRNA 0.51 32 3632472 3646877

Neighbor

gene id symbol gene type direction distance location
CI01000030_03571883_03576733 BTBD1, BTBD2, BTBD2.S, BTBD2A coding downstream 55565 3571025 ~ 3576907 (-)
CI01000030_03551269_03557640 CREB3L3A coding downstream 74276 3550874 ~ 3558196 (-)
CI01000030_03545674_03546876 RXFP3.2B coding downstream 85419 3545142 ~ 3547053 (-)
CI01000030_03491770_03493119 CELF5A coding downstream 138731 3490119 ~ 3493741 (-)
CI01000030_03273527_03314595 CELF5, CELF5A coding downstream 317877 3273527 ~ 3314595 (-)
CI01000030_03647991_03655331 MBD3B, MBD3 coding upstream 367 3647244 ~ 3655331 (-)
CI01000030_03662326_03676734 TCF3B, TCF3 coding upstream 15107 3661984 ~ 3677572 (-)
CI01000030_03706598_03708425 ZBTB7A coding upstream 59464 3706341 ~ 3708733 (-)
CI01000030_03713071_03713513 NA coding upstream 65748 3712625 ~ 3713787 (-)
CI01000030_03719059_03726730 MAP2K2B, MAP2K2, MAP2K2A, MP2K2, TMEK coding upstream 71658 3718535 ~ 3727455 (-)
G160298 NA non-coding downstream 54890 3577378 ~ 3577582 (-)
G160295 NA non-coding downstream 90868 3540820 ~ 3541604 (-)
G160289 NA non-coding downstream 100999 3531241 ~ 3531473 (-)
G160245 NA non-coding downstream 123385 3508830 ~ 3509087 (-)
G160239 NA non-coding downstream 129585 3502511 ~ 3502887 (-)
G160263 NA non-coding upstream 10158 3657035 ~ 3658720 (-)
G160331 NA non-coding upstream 162547 3809424 ~ 3809754 (-)
G160332 NA non-coding upstream 163047 3809924 ~ 3810227 (-)
G160333 NA non-coding upstream 164213 3811090 ~ 3811355 (-)
G160351 NA non-coding upstream 322916 3969793 ~ 3970072 (-)
G160213 NA other downstream 163310 3466353 ~ 3469162 (-)
G158980 NA other downstream 1099908 2499584 ~ 2536375 (-)
G158914 NA other downstream 1180754 2450849 ~ 2451718 (-)
CI01000030_02155901_02157314 NA other downstream 1473181 2155584 ~ 2157390 (-)
G160713 NA other upstream 1772242 5419119 ~ 5423513 (-)
G160712 NA other upstream 1810083 5456960 ~ 5512074 (-)
G160949 NA other upstream 2150420 5797297 ~ 5800426 (-)
CI01000030_06131710_06138371 NA other upstream 2486498 6131090 ~ 6138406 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 3054178 6701055 ~ 6704745 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location