CI01000032_00541441_00550673 (MAP7A)


Basic Information

Item Value
gene id CI01000032_00541441_00550673
gene name MAP7A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 541441 ~ 550749 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_00541441_00550673.mRNA
ATGCCAGCTCATCTGAGCCTGGCAGAGCAGGAACGGGAGTGGAGGAAGACGGGCAAAACAGCAAAGCTGGGTCTCGCTGCGATCGCAGAGAAAGGACAGCTGAAGATGTACGACACTGCGAGGAAACAGAGAGATTCCAGCTCTGATGTGAAACCCACAGCCCTGGAGCAGAAAAGAAAAGCATGTGCTCCACCGCACATTAAATCAGCCCAGATTAATATCAATAAACGAAATGGAAATAATGCAGAGTCAAATGCTCTAAAAGTGGACGAGAGACTGCGACTGGCCCGGGAACGGAGAGAGGCGTACCAAAAACAGCTGGCACTGCGCGAGCGTGGCTGGCTGGCGAGGGAGGAGCGGGCCAAGCTGTTCTACGAGAAACACCTGGAGGAGCGACGGAAGAAGTTGGAGGAGCAGCGACAAAGAGAGGAGAGGAGGAGGATGGCGGTTGAGGAGAAACGCAGACAGAGGGTCAAAGAAGAAAGAGAGCGTTATGAGTCTGTGGTGCGGAAGACGATGGAAAAAAGTCAAAAGGCCAAACAGAAACCTGGCCACTGCTCACGAAGGGTCACCAAGAATGAAAACAAAAATGCTAAACACCGCTCTCTTAGTCAGTGGGAGATTGACCTTGTCCGTCGCCTTCAGACCCCTACCGTCTCTTATCTAGCCAGAAGCAAGAGTGCTGTGTGTCTGTCACGAGACACAGCCTCATGTCATACCATGAACTCCAGCACCACACGAAAGCCAAAGGTGCATTGTGGGAAAGTGCCAAACAGGCCTGCAAGCTCAAGTCCAAACGTCACTATCCGCAGAACAACCAACAGAGAGCTGAAAAATCACAAAATTATACTGTGGGTCATTCTTTCTTTATATACCCTATTTCCAAGGCTGCAGAACAGATCACATGTCAGACATGCCACACTTAAACAAGACAGTTTACCTCCGCTGCCAGAAGAGGAGGATCTAGAACCAGAGCATGAACTCTCCTCTGGTCAGCCTGACGAAACACTTCCTCAACAACGTCCAGCTACTAACGGGCCTCTGAATCCACCGGCAGCCTCTCAGATTCCTAATGGACCAAGTCGGATTGGTGACGGCGCTCAAGTCAGACCTTCTTCTTGGACTACAGACCCTGAGCAGGCCTCTCGCTTACTGGCAGAGAAAAGGAGGCAAGCCCGACTCCAGAGAGAGAAAGAGGAAGCGGAACGCAGACAAAAAGAGGAGACAGAGAGAAAGAGCAGAGAGGAACTGGCCCGTCGGAGAGCTGAAGAACGAGCCAGACAGGAGGCAGAAACCCTGAGACTGGAGGAAGAAAAGAGGAAGAAAGAGGAAGAAGAGCGACTTCAGGCTGAGGAGGAAAACGCTCGCAGACAGAGAGATGAGGAAAAAAGGCTTCAACAGCAGAGAGAGGAAGAGGCTCGTCAAAGGGTGCTGGCAGAGCAGCAGAGACTGGAAAGAGAGAGCCGTTTCCAGAGAGAGGAGGCCGAACGCCAAGAACGGAAAAAGCGCCTGGAACAAATCATGAAAAGAACAAGAAAGACAGACTCTGAAGAAAAGAAAACTGCATCAGACAACTTGCCTTGTGAGAATGTGAATCCTGTAATCAGGCTACCAGGTCCAGGAAAAACGCCAAAGCTGGAGCTGAGGGACGAGGAGGATATGCTTCCTACTGTGGCCTTCAAAGAGCGCCGATCCTTCCGCAGTCTTTCTGGCCTGGATGAGATTCAAGCCCATCAGCAAACTGGTATGTGAATACATTCATCTCTGGATATCTTCATTTAAATCTAACATAACTAAATATACCAATTTAATATTATGTAATTTAAGA

Function

symbol description
map7a Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. Orthologous to human MAP7 (microtubule associated protein 7).

GO:

id name namespace
GO:0015630 microtubule cytoskeleton cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_00541441_00550673.mRNA True 1828 mRNA 0.50 13 541441 550749

Neighbor

gene id symbol gene type direction distance location
CI01000032_00503123_00508468 PNOCA coding upstream 32954 503123 ~ 508487 (+)
CI01000032_00388582_00397426 HMBOX1A, HMBOX1B, HMBOX1 coding upstream 143954 388367 ~ 397487 (+)
CI01000032_00367671_00375509 KCNK13, KCNK13A coding upstream 165641 366723 ~ 375800 (+)
CI01000032_00327020_00343184 NA coding upstream 198213 326645 ~ 343228 (+)
CI01000032_00284138_00297125 NA coding upstream 244108 284019 ~ 297333 (+)
CI01000032_00716503_00725057 NA coding downstream 165754 716503 ~ 725436 (+)
CI01000032_00731152_00733159 GJA10, CX52.7 coding downstream 180069 730818 ~ 733454 (+)
CI01000032_00767450_00771237 MANEA coding downstream 216327 767076 ~ 771395 (+)
CI01000032_00778485_00779572 FUT9A, FUT9 coding downstream 227736 778485 ~ 780766 (+)
CI01000032_00799216_00801849 FHL5 coding downstream 248086 798835 ~ 801969 (+)
G165230 NA non-coding upstream 24215 510183 ~ 517226 (+)
G165110 NA non-coding upstream 77818 463413 ~ 463623 (+)
G165034 NA non-coding upstream 273835 265712 ~ 267606 (+)
G164956 NA non-coding upstream 399667 140159 ~ 141774 (+)
G164929 NA non-coding upstream 416009 92573 ~ 125432 (+)
G165253 NA non-coding downstream 10445 561194 ~ 599400 (+)
G165263 NA non-coding downstream 27416 578165 ~ 578424 (+)
G165284 NA non-coding downstream 50173 600922 ~ 601686 (+)
G165236 NA non-coding downstream 53615 604364 ~ 606120 (+)
G165242 NA non-coding downstream 55630 606379 ~ 606749 (+)
G165570 NA other downstream 798829 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 1147739 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 2207983 2773889 ~ 2774501 (+)
G166734 NA other downstream 2284565 2835314 ~ 2849684 (+)
G166765 NA other downstream 2406039 2956788 ~ 2957213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012005 map7a coding NC_007128.7 CM002901.2 16051448 ~ 16069905 (-)