CI01000032_00716503_00725057


Basic Information

Item Value
gene id CI01000032_00716503_00725057
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 716503 ~ 725436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000032_00716503_00725057.mRNA
AACGTTTGCTGTCCAGCTCACCTGGTCTCGCTTAACGGTCACACGAAGGCAGCGCTCACTCCGCAGGGGGCGGTTGGCGGTTACCAAGGCGGCCTGGAAGATGGTCATCAAACAGCCCTGCACCGGGCAGCTGTTGTGGGAAACCGTGACACCATCTCTGCCCTCATCCATGGGGGCTGTGCACTTGACCTACAAGACAAGGAAGGAAACACTGCTTTGCATGAGGTATCATGGCATGGCTTCAGCGAATGTGTAAAGCTACTGGTCAAAGCTGGTGCCGATGTCCAAGTGAAGAACAAAGCAGGTGACACATGTTTGCACATTTCTGCACGCTACAATCACTTGTCCATGATTAAGATCCTCTTGGGTTCTTTCTGCTCTGTGGCTGAGAAAAACCAGACAGGAGACACTGCGCTCCATGTCGCTGCTGCTCTAAATCACAAGAAAGCTGTCAGTCTGTTACTGGAAGCAGGAGCTGATGCAAACATCAGAAACAATACAGGCCACACTGCTCTTGATAAAGCCCAAGACAATAACAACCGAGATTTGGCTATTCTTCTAGCAAAATCTAATCAGGTCCAGAGGTTTGCTCGTGGAAAGACGGTGAGAAAAAGAAGAGATGTGTTGCAGGCCCAGAAGAGAACTCAGTCCCTCCCCAGAGCTCAACCCTCCCGAGAGAAGGACTGTACTGAAGTGGCTGAAGACACAAACAACAGCGATCAAGTATTTCACAGGATACAACCTGAACGGAACACAGCAACTCTGAGCCCCTGCACAAGGAGAAAGATCAGGAGTCCGAGAAGGAAGTTGGAACATGTGTCCCGGAGAGAGTATCAGCTCCATGAGAGAGGATCTTCATCCCAGAGAGTGAAACACAGCAGCCCCAGCTCTCAGGAGGAAGATCAAACTCCGGGAAAAGTGTATCAGCTTTATACACTATACAGAGACAAAGATGGACAGATAAAGCAGGCTCCTGCAAATGACTGTCATTGTAAGCCCCTCATTAAAACGCTGGAGAATAAGCTGAAAGCCACAAAGATGGAGATGAGGTCAGAAATTCACACTGTCCAAGAGGAGATGAACTGCAGGCTCGGCAGAATAGAACAAAAACACAAGCATCAGATTAAAGTGCTTGAGAAACTCACACAGGAGCGTGTGTCGGCTGAGAGGATGGAGTGTCATTATCGAATCAATCAGAGGGCCACACTGGAACGCATGGAGGGCGAAAGAAAACAGCAGTTAGCTGCTACCAATGCTGTAAAAAGCTGGTGCATGTCTAAGATTCAGGATTTTGAGGTGCAAAAGCCTGTCGAGACACAATACTACAAACTCCTGCGCTCTCCATCGGTGGATCACTCTCTGGTGGACTCAGATCCCGAGGGTCTCCCGCTGCTGTCGCTCGTCTCTGAGGAGAGCTCCAGCTCACTGGCCACCTACGTCAATGTGTTACCCAGTCCAGGAGCAGCTCCTAACACCGATGTGAAAAGTCTTGAGTTTGGGGATGCATTTGGGAGGAGATACTTTGAGATGAAGCTGAATGGTTCTTCAGCTCCTTCCATGGTTAAACACAAGCCTCTTTCACGGAAGCTGGCGACTGCTGACCCCAAGTGGCATCGAGCTGAACTGCAGGAGGTTGATGTCTCAAAGTCGAGGTCAGACAAGGGGGATGAACTCTGTGACAGCAGTGCCAGCAGTAGCCTGTCCACATCCAGCAAGCAATTCAATGACAGCGATACAGAACCAGCGCTCGGCCCAGCCTGGAAACACAGCAGGCACCTGAAGGATAGGATTAAAGCACACCACACTCAAACCCAGCAGCGCGGCACCATGAAGACCCTGGAGTTGTTTTCCCAGCGGCCCGTGGAGGTCACCTTCACTCAAGAGCGGGCAAACTTGCACGCCATGGAGGTGACGCAGCATTTCTTTGAGACGGTCTCCACGCAGCTGGAACACTGGTATGAAAGGAAGATCCAGGAAGCGCAGAAGGTGTCGGAACAGAAAGCTCTGCAGGATAGAGCCAGTCTACTGGAGAAGATCAACACGCTAGAGGAAGAGTTACAGAGGCTTCGCACTAACACTAAAACCGACTGTTGACACATACGGTACAATGACCACATACCTGGATTCCACTTAATATGAAAGTCGTGGCAATATAAACTAGTTAGGGGCTTTGTAAATTGTGGTAGAGTAAACTTTAAAGTAGAGTTTTATTGTACTATAGTAAAACACAGGGGTGCAGAACTTATTTAAAATGTATAGGACTGTCTCCAAATCAAAGTTTCATTTTGACAGGCATCATTATATGTAGCTTGTGGTACTTTTTTGAGACCACAATGCCCTGTTACCTGATTAAGTATATCTTTGCTGAGTGTTTAGTAAAGGAGAAAAAAATGTATGGACTACGTATTTACAGCTTATCAAAGTGAATTCACCTCAGGTCACCCATGGAATAGTGTATTCTGTCATCAGAATA

Function

NR:

description
diversin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000032_00716503_00725057.mRNA True 2473 mRNA 0.48 13 716503 725436

Neighbor

gene id symbol gene type direction distance location
CI01000032_00541441_00550673 MAP7A coding upstream 165754 541441 ~ 550749 (+)
CI01000032_00503123_00508468 PNOCA coding upstream 208016 503123 ~ 508487 (+)
CI01000032_00388582_00397426 HMBOX1A, HMBOX1B, HMBOX1 coding upstream 319016 388367 ~ 397487 (+)
CI01000032_00367671_00375509 KCNK13, KCNK13A coding upstream 340703 366723 ~ 375800 (+)
CI01000032_00327020_00343184 NA coding upstream 373275 326645 ~ 343228 (+)
CI01000032_00731152_00733159 GJA10, CX52.7 coding downstream 5382 730818 ~ 733454 (+)
CI01000032_00767450_00771237 MANEA coding downstream 41640 767076 ~ 771395 (+)
CI01000032_00778485_00779572 FUT9A, FUT9 coding downstream 53049 778485 ~ 780766 (+)
CI01000032_00799216_00801849 FHL5 coding downstream 73399 798835 ~ 801969 (+)
CI01000032_00811247_00821148 NA coding downstream 85811 811247 ~ 821234 (+)
G165317 NA non-coding upstream 7101 704041 ~ 709402 (+)
G165313 NA non-coding upstream 25013 690841 ~ 691490 (+)
G165299 NA non-coding upstream 69881 646335 ~ 646622 (+)
G165242 NA non-coding upstream 109754 606379 ~ 606749 (+)
G165236 NA non-coding upstream 110383 604364 ~ 606120 (+)
G165316 NA non-coding downstream 8152 733588 ~ 735138 (+)
G165512 NA non-coding downstream 147784 873220 ~ 873489 (+)
CI01000032_01000707_01061531 GRIA3B, GRIA3 non-coding downstream 330439 999178 ~ 1061833 (+)
G165506 NA non-coding downstream 360488 1085924 ~ 1087253 (+)
G165505 NA non-coding downstream 374182 1099618 ~ 1102526 (+)
G165570 NA other downstream 624142 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 973052 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 2033296 2773889 ~ 2774501 (+)
G166734 NA other downstream 2109878 2835314 ~ 2849684 (+)
G166765 NA other downstream 2231352 2956788 ~ 2957213 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012003 ankrd6a coding NC_007128.7 CM002901.2 15756828 ~ 15777350 (-)