G165263


Basic Information

Item Value
gene id G165263
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 578165 ~ 578424 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU187723
GAACGATTTAAGTTCTAGGAACTCCTTTTGGGGAGTAGGGTCTAAACCAACACTATAGGAACTATCAGTGACGTGAGTGTAACGCATGTCAACCATGGGCACCCGGCATTTTTAAAAAGCCGTGTAAACATATTTACTTCACGAACATGGAAAACAGTGATAACGGCATTTACCTGCTGTTCTTTTCTCCGCCTTGATGATATGCAACACCGTCATAGGCGATTTTATCTCTTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187723 True 236 lncRNA 0.42 2 578165 578424

Neighbor

gene id symbol gene type direction distance location
CI01000032_00541441_00550673 MAP7A coding upstream 27416 541441 ~ 550749 (+)
CI01000032_00503123_00508468 PNOCA coding upstream 69678 503123 ~ 508487 (+)
CI01000032_00388582_00397426 HMBOX1A, HMBOX1B, HMBOX1 coding upstream 180678 388367 ~ 397487 (+)
CI01000032_00367671_00375509 KCNK13, KCNK13A coding upstream 202365 366723 ~ 375800 (+)
CI01000032_00327020_00343184 NA coding upstream 234937 326645 ~ 343228 (+)
CI01000032_00716503_00725057 NA coding downstream 138079 716503 ~ 725436 (+)
CI01000032_00731152_00733159 GJA10, CX52.7 coding downstream 152394 730818 ~ 733454 (+)
CI01000032_00767450_00771237 MANEA coding downstream 188652 767076 ~ 771395 (+)
CI01000032_00778485_00779572 FUT9A, FUT9 coding downstream 200061 778485 ~ 780766 (+)
CI01000032_00799216_00801849 FHL5 coding downstream 220411 798835 ~ 801969 (+)
G165230 NA non-coding upstream 60939 510183 ~ 517226 (+)
G165110 NA non-coding upstream 114542 463413 ~ 463623 (+)
G165034 NA non-coding upstream 310559 265712 ~ 267606 (+)
G164956 NA non-coding upstream 436391 140159 ~ 141774 (+)
G164929 NA non-coding upstream 452733 92573 ~ 125432 (+)
G165284 NA non-coding downstream 22498 600922 ~ 601686 (+)
G165236 NA non-coding downstream 25940 604364 ~ 606120 (+)
G165242 NA non-coding downstream 27955 606379 ~ 606749 (+)
G165299 NA non-coding downstream 67911 646335 ~ 646622 (+)
G165313 NA non-coding downstream 112417 690841 ~ 691490 (+)
G165570 NA other downstream 771154 1349578 ~ 1357567 (+)
CI01000032_01698448_01701006 NA other downstream 1120064 1698448 ~ 1701288 (+)
CI01000032_02773889_02774396 NA other downstream 2180308 2773889 ~ 2774501 (+)
G166734 NA other downstream 2256890 2835314 ~ 2849684 (+)
G166765 NA other downstream 2378364 2956788 ~ 2957213 (+)

Expression


Co-expression Network