CI01000034_02563086_02564052


Basic Information

Item Value
gene id CI01000034_02563086_02564052
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2562938 ~ 2564172 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02563086_02564052.mRNA
GTATAAAACGGACCATTTTGCATCCATGTCTTCAGAATTAGATTTTCAAGAGGTTCAGCACCGAGTACTACTTTACAGCTCTTTTAATTTTTTGACTTGGACACTCAGCATCATCTTTCAGATTTTTGTCTCATATTATAGCTACAGAATGGCACTTTGGAAATATATCGCTTTATTGAGTCCATTCCTTTTTTTCTCCCAAATTTGTTCAATGCCAACAAAATGCATCCTGCGGCAGACGCTTGTGAAAGAAACTCACAGTCTACTTGAGAATATGGGAGGTCTTTTTCCTCGTGAATGCTTGGAAGAAAACGTCAAAATAACCTTCCCGAAATCTGCACTGCAATCAAATGACTCCAGTCAGAACATCGTTGTGACAAAGGCAGTGTATAAAATCATGGAGCACATTGATTTCCTGTTTGCTAACGACAGTTATCCAGAGTCCTGGAACCAGCTGAAAGTTGAGCATTTTCAAAACATAGTTTCCCGTTTAACTGGCGAGAAAAAATGTATTATGGGGAGAAAGCACGGACCCGTGGATGATTTTCCAGCAAGAGACAATGCTCTGAAAACCTTCTTTGATAAACTGGCCACTCTCCTCAGAGACAAGGACCACAGTGTCTGCGCATGGGAGGTGGTTCGAAAGGAGCTCCTGTGTGTTCTCCGTGACATTCTCAAGCTTAAATTATTCAAAATGTAGTTCTCTGTAGACTGACTATTTATTTATTTATTTATTTATTTATTATTTATTTATGTATTTATTTATTATTTATTTATTTGATTGATTTGTAAACCATTCAATCACTGTACTGAACACTCA

Function

NR:

description
IFNc3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02563086_02564052.mRNA True 820 mRNA 0.38 5 2562938 2564172

Neighbor

gene id symbol gene type direction distance location
CI01000034_02550332_02552258 NA coding upstream 10099 2550332 ~ 2552839 (+)
CI01000034_02421189_02423360 NA coding upstream 139411 2421026 ~ 2423527 (+)
CI01000034_02275470_02281951 CYB561 coding upstream 280334 2274601 ~ 2282604 (+)
CI01000034_02256162_02260170 NA coding upstream 302474 2255765 ~ 2260464 (+)
CI01000034_02231423_02231755 NA coding upstream 330814 2231303 ~ 2232124 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 98037 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 123773 2687945 ~ 2705564 (+)
CI01000034_02770255_02774341 NA coding downstream 205927 2770099 ~ 2774567 (+)
CI01000034_02957414_02963572 NA coding downstream 392923 2957095 ~ 2964031 (+)
CI01000034_03145811_03149071 NA coding downstream 581453 3145625 ~ 3149071 (+)
G169921 NA non-coding upstream 52244 2509779 ~ 2510694 (+)
G169922 NA non-coding upstream 53907 2506645 ~ 2509031 (+)
G169906 NA non-coding upstream 85472 2476276 ~ 2477466 (+)
G169760 NA non-coding upstream 258840 2235008 ~ 2304098 (+)
G169946 NA non-coding downstream 24768 2588940 ~ 2589235 (+)
G169947 NA non-coding downstream 26189 2590361 ~ 2590615 (+)
G169974 NA non-coding downstream 91024 2655196 ~ 2658101 (+)
G169996 NA non-coding downstream 102989 2667161 ~ 2667374 (+)
G169983 NA non-coding downstream 146126 2710298 ~ 2718282 (+)
G169806 NA other upstream 225248 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 831761 1729413 ~ 1731179 (+)
G169340 NA other upstream 1252060 1250219 ~ 1310878 (+)
G169394 NA other upstream 1369378 1150297 ~ 1193560 (+)
G169357 NA other upstream 1443919 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 869964 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1560928 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1630466 4192311 ~ 4200636 (+)

Expression


Co-expression Network