CI01000034_02957414_02963572


Basic Information

Item Value
gene id CI01000034_02957414_02963572
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2957095 ~ 2964031 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_02957414_02963572.mRNA
AGATATAAACACCACCAAGGAAGATGAGGGGAGAGCCGTATGGATTCTCACTGGGTGTGTTACAAACCTCTGTGTCTTTTCTTTACCTAGAGAGTGACTGACTTCCCCAAGTGAGTGTGGATAACCCAGCTAGTTGGCTAAACTACCCTCTCTTCGCTGGGCAAGGAGGAACTGCACTTCTCCCCACAGAACACTTCACCTGCACGAAACACAGAGACTGAGTTTGATTGCACCTAAAGACGCCTTCCGGGGCGACACTTCACTGCATTCTGTGTCTGTTCTCCTCTTTACCCATAGTGGAGCGCTACATTGGTGGATAATGCGGGCAGGAGACCCCAGACACGAGGATCCCAGTGAGGCAGCCTCTCTCCCTAGTGTGGGGGATGTAATCCGTCATCTTGCCGTAGTGTCGGTGTGCCAACAACAGTTATCAGAACGGCTTGTAGTGGGACAAACCCAGGTGGCTGAGGACCTGGTGTGTCTTCGTGCAGACTACACCAGGACCCTCTTGGCAGATGTCAGGCCCCTGGCGCAACCCACAGCACTTCCAAGGATGACTGAGCAGGATGACCCAGAAGCTTTTTTGCACACGTTTGAAGTTGTTGCAAGGAGAGGAGGCTGGGAAAAATCGGAGTGGGTCCAGAAGTTAGCACCCCTTCTCACTGGGGAACCACAACAAGTTTACTTCTCCCTCCCACCACCCCACCTGGATGACTATGATTTTCTGAAGAAAGAGATCCTGGCTCAGGTAGGACTCTCCCCTGTCTGTGCTGCCCAGAAGGCCAATGATTGGGTGTATGATGCGCAGGTACCCATCCGCATGCAAGCGGCCCAACTGACTCGACTCGTCAAGCTTTGGTTATTGTCAGATGATGTCACCCTGACTGAGGTTATAGAGAAGGTCCCTGTGGACAGACTGTTATGTGCTCTACCCTGCCCACACAGATGCACTGCCGGACTACAAAGTCCACAAACTCTAGCGGAGCTGGTGGAGGCAGTAGAGCTGTCCGAGGCTGCAGTGGCAAGGGAATCAGGAGAGAGAGCTGCCTCATTCCCCCGGAGGGTTACTGGGGAGCGGCGAGAGATGATCAGCACCCACAAGTTGGTGAGCGCTACAGTCGACTGTCCAAGGCTGGGCTGGCGAAGACTCAGACCGAGAAAATCTGTTACTTCATCCCCTGAGAGTTTCACACCAATTCACACTCACAAAGCCCTGAACGCAAACAGATCTGTGGTGTATACCAGCATTCCAGCATTAGTGCTCGATTTACCCCATGCTTCAACTGCAAACCAAAATAAACCCCACTTTAAGACTAATGGCTCTTTGAACGGCAAGAGGGATGGAGAGTTTCTGCTCATGTTTGATTTGCTGTTATGTGACGGCATAAGCAGGCTGTCTCTAATTCATAGCCCTGGATATAGAGACTGCTTGTTCCGCAAGGGTGCTGAAGGCTGGTTTTGTGTCGAGGGACGGTTGTGCCTTCAGACTTTCCTGTCACTTGGAACAGTTTCACTTCATCACCCTCTGCCACCACCACTGTAGGGCTATTGTATAACCCATGTGCTGGACAGGATCACCCATGAGGGCTTCAACCCATACTGTACACACACAATAGTTTGACAAACAGATAGAGAGCTTCATGCTGACATGACCAGCAGGGCAGTAACTAACTAAAAGTAGTGACACTACTAATTTAACTACATCTTTAAGTAGCTTGAAGATACTTCAGCTGTTCATAATAGTGTATCTTGTCCACTAACAATCCTTCACTTCTATGAAGCATTTAGAATGATTCATTTTAGCAATTCAGTCATTTAAGTGAATCAGTTAAATGAACTGATTCAAACAAATGCCTCACTGACTTCCTGCAAAGATGCCAGCCTAAATAAAGAAAAAAAATTATTATTTATTTTTTTTTTTTACAAAATATATCTAGTTAAATGCTGCTGTTTATCAATGTTTTCTTTATTTATTAAAAAAAAATGTTTTTAGTCATTTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_02957414_02963572.mRNA True 2002 mRNA 0.47 4 2957095 2964031

Neighbor

gene id symbol gene type direction distance location
CI01000034_02770255_02774341 NA coding upstream 182528 2770099 ~ 2774567 (+)
CI01000034_02688043_02705526 MAPTB coding upstream 251531 2687945 ~ 2705564 (+)
CI01000034_02662209_02664649 MYL4 coding upstream 291555 2662209 ~ 2665540 (+)
CI01000034_02563086_02564052 NA coding upstream 392923 2562938 ~ 2564172 (+)
CI01000034_02550332_02552258 NA coding upstream 404256 2550332 ~ 2552839 (+)
CI01000034_03145811_03149071 NA coding downstream 181594 3145625 ~ 3149071 (+)
CI01000034_03151977_03170691 NA coding downstream 187351 3151382 ~ 3170738 (+)
CI01000034_03195900_03212503 FAM171A2 coding downstream 231277 3195308 ~ 3212685 (+)
CI01000034_03214677_03229150 SYNGR1, SYNGR1A coding downstream 250184 3214215 ~ 3229868 (+)
CI01000034_03235135_03236084 TCAP coding downstream 270895 3234926 ~ 3236590 (+)
G170073 NA non-coding upstream 71494 2881891 ~ 2885601 (+)
G170066 NA non-coding upstream 112008 2844834 ~ 2845087 (+)
G170050 NA non-coding upstream 132979 2823711 ~ 2824116 (+)
G170047 NA non-coding upstream 135805 2821060 ~ 2821290 (+)
G170043 NA non-coding upstream 141296 2815573 ~ 2815799 (+)
G170165 NA non-coding downstream 97450 3061481 ~ 3062028 (+)
G170260 NA non-coding downstream 167106 3131137 ~ 3131420 (+)
G170263 NA non-coding downstream 174772 3138803 ~ 3139056 (+)
G170244 NA non-coding downstream 281715 3245746 ~ 3249130 (+)
G170274 NA non-coding downstream 293759 3257790 ~ 3258069 (+)
G169806 NA other upstream 619405 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 1225918 1729413 ~ 1731179 (+)
G169340 NA other upstream 1646217 1250219 ~ 1310878 (+)
G169394 NA other upstream 1763535 1150297 ~ 1193560 (+)
G169357 NA other upstream 1838076 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 470105 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1161069 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1230607 4192311 ~ 4200636 (+)

Expression


Co-expression Network