G170260


Basic Information

Item Value
gene id G170260
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3131137 ~ 3131420 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193436
TGTAAGGAACCCCGCATCGGCCCAAAAACGGAATCCGACGGCCTGGGCGAAGGTTAACGCGTGTATGCCTTTTCAGCGCATCTGTGAAGTTCACTTAATTTCACTCGTTTAATCTGACTCCAATTTTAAATGATTATTACTCTTAGGTTTTGTTCCCAATTGGAAATTAATCATTTGTTATGTATTAATTTTGATTTTTGATTATTCTGGGTATCTCATAATTTCAATTATTCGTTCATTACGGTCTCATCATCGCTTAGAGAAATTCACATCGGCCGACTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193436 True 284 lncRNA 0.39 1 3131137 3131420

Neighbor

gene id symbol gene type direction distance location
CI01000034_02957414_02963572 NA coding upstream 167106 2957095 ~ 2964031 (+)
CI01000034_02770255_02774341 NA coding upstream 356570 2770099 ~ 2774567 (+)
CI01000034_02688043_02705526 MAPTB coding upstream 425573 2687945 ~ 2705564 (+)
CI01000034_02662209_02664649 MYL4 coding upstream 465597 2662209 ~ 2665540 (+)
CI01000034_02563086_02564052 NA coding upstream 566965 2562938 ~ 2564172 (+)
CI01000034_03145811_03149071 NA coding downstream 14205 3145625 ~ 3149071 (+)
CI01000034_03151977_03170691 NA coding downstream 19962 3151382 ~ 3170738 (+)
CI01000034_03195900_03212503 FAM171A2 coding downstream 63888 3195308 ~ 3212685 (+)
CI01000034_03214677_03229150 SYNGR1, SYNGR1A coding downstream 82795 3214215 ~ 3229868 (+)
CI01000034_03235135_03236084 TCAP coding downstream 103506 3234926 ~ 3236590 (+)
G170165 NA non-coding upstream 69109 3061481 ~ 3062028 (+)
G170073 NA non-coding upstream 245536 2881891 ~ 2885601 (+)
G170066 NA non-coding upstream 286050 2844834 ~ 2845087 (+)
G170050 NA non-coding upstream 307021 2823711 ~ 2824116 (+)
G170047 NA non-coding upstream 309847 2821060 ~ 2821290 (+)
G170263 NA non-coding downstream 7383 3138803 ~ 3139056 (+)
G170244 NA non-coding downstream 114326 3245746 ~ 3249130 (+)
G170274 NA non-coding downstream 126370 3257790 ~ 3258069 (+)
G170276 NA non-coding downstream 128362 3259782 ~ 3260036 (+)
G170280 NA non-coding downstream 149986 3281406 ~ 3283172 (+)
G169806 NA other upstream 793447 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 1399960 1729413 ~ 1731179 (+)
G169340 NA other upstream 1820259 1250219 ~ 1310878 (+)
G169394 NA other upstream 1937577 1150297 ~ 1193560 (+)
G169357 NA other upstream 2012118 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 302716 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 993680 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1063218 4192311 ~ 4200636 (+)

Expression


Co-expression Network