G169974


Basic Information

Item Value
gene id G169974
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2655196 ~ 2658101 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193109
CGCCTCGCACATGCCTATCCACCTTATTTTTTACAGTTTACTGCAACATGATATTGATATTCTTCTCATCATTTCCCTATAGCGGCTAATAAATTGGATTCGGAAGTCTCGCACATTCACAAAAAACACATTATTTCCGCGTTGAAAAATAAGGCCTTGAAGTCATTCTTGATAAGGAGGAAGATGCTCTGTTCAAGACAAGCCCAGCTTTGAAAGTGTTTGAGACTCCCACCACCTCTGAGACTCGCACTGCCTCTCTGACTGACACTGAGATTGACTAACATCTGAGATTGACACGGCATCTGAGACCAACACTGCCTCTGAAATTGACACTGCCTCTAAAATGACACTGCCTCTGAAACTGACACTGGCTCTGAGGCTGCCTCTGAAACTGCCTCTGAGACTCGCACTGCCCCTCAGATTGACATTGTCTTTCAGACTGAGATTGTCTTTGAGTCTGACACTGCCTCTGAGACTGACAATGCTTCTCAGACTGACACTGCCTTGGAGACAACACCACCATGCCTTTTAACTTCCATTTTCTCTGAGGCTGTCACTGCATCCGAGACTGACACTGTCTCTCAATTGCCACTGGATTTGATACAGCTGTTGCTTCTCAGACATCCACTGTCTCTGAGACTGTCACTCCCTGAAGACCTGAACCCCTTTTAACATCTGTGTAACACAGTTCATAGATCAGGGAAGAAGGAGATGGGAACCGTTGAATGTTCAACAATAAATTAATAAATAAACAGACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193109 True 759 lncRNA 0.45 3 2655196 2658101

Neighbor

gene id symbol gene type direction distance location
CI01000034_02563086_02564052 NA coding upstream 91024 2562938 ~ 2564172 (+)
CI01000034_02550332_02552258 NA coding upstream 102357 2550332 ~ 2552839 (+)
CI01000034_02421189_02423360 NA coding upstream 231669 2421026 ~ 2423527 (+)
CI01000034_02275470_02281951 CYB561 coding upstream 372592 2274601 ~ 2282604 (+)
CI01000034_02256162_02260170 NA coding upstream 394732 2255765 ~ 2260464 (+)
CI01000034_02662209_02664649 MYL4 coding downstream 4108 2662209 ~ 2665540 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 29844 2687945 ~ 2705564 (+)
CI01000034_02770255_02774341 NA coding downstream 111998 2770099 ~ 2774567 (+)
CI01000034_02957414_02963572 NA coding downstream 298994 2957095 ~ 2964031 (+)
CI01000034_03145811_03149071 NA coding downstream 487524 3145625 ~ 3149071 (+)
G169947 NA non-coding upstream 64581 2590361 ~ 2590615 (+)
G169946 NA non-coding upstream 65961 2588940 ~ 2589235 (+)
G169927 NA non-coding upstream 67167 2548634 ~ 2588029 (+)
G169921 NA non-coding upstream 144502 2509779 ~ 2510694 (+)
G169922 NA non-coding upstream 146165 2506645 ~ 2509031 (+)
G169996 NA non-coding downstream 9060 2667161 ~ 2667374 (+)
G169983 NA non-coding downstream 52197 2710298 ~ 2718282 (+)
G170024 NA non-coding downstream 117094 2775195 ~ 2775530 (+)
G169984 NA non-coding downstream 126634 2784735 ~ 2793651 (+)
G169806 NA other upstream 317506 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 924019 1729413 ~ 1731179 (+)
G169340 NA other upstream 1344318 1250219 ~ 1310878 (+)
G169394 NA other upstream 1461636 1150297 ~ 1193560 (+)
G169357 NA other upstream 1536177 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 776035 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1466999 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1536537 4192311 ~ 4200636 (+)

Expression


Co-expression Network