G169996


Basic Information

Item Value
gene id G169996
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 2667161 ~ 2667374 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193169
GTTGAATTCTACAGGATGTCCGGGTGACGTGTGCGTCGCGTCATGTTTACAACTGTGACAGTGAGCGCTTACCAGGATCAACTAAACGCTGGATTTTCAAAAGTATGTGAAGTTCGCGGCACCATTGTTGCAGTAAACTTGCCCAACTTTCTTGAATGAATAATTTATTAGATGCACGCCGGTCTGCACAGAGCCTGTTCAAACGGCCTGGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193169 True 214 lncRNA 0.47 1 2667161 2667374

Neighbor

gene id symbol gene type direction distance location
CI01000034_02662209_02664649 MYL4 coding upstream 1621 2662209 ~ 2665540 (+)
CI01000034_02563086_02564052 NA coding upstream 102989 2562938 ~ 2564172 (+)
CI01000034_02550332_02552258 NA coding upstream 114322 2550332 ~ 2552839 (+)
CI01000034_02421189_02423360 NA coding upstream 243634 2421026 ~ 2423527 (+)
CI01000034_02275470_02281951 CYB561 coding upstream 384557 2274601 ~ 2282604 (+)
CI01000034_02688043_02705526 MAPTB coding downstream 20571 2687945 ~ 2705564 (+)
CI01000034_02770255_02774341 NA coding downstream 102725 2770099 ~ 2774567 (+)
CI01000034_02957414_02963572 NA coding downstream 289721 2957095 ~ 2964031 (+)
CI01000034_03145811_03149071 NA coding downstream 478251 3145625 ~ 3149071 (+)
CI01000034_03151977_03170691 NA coding downstream 484008 3151382 ~ 3170738 (+)
G169974 NA non-coding upstream 9060 2655196 ~ 2658101 (+)
G169947 NA non-coding upstream 76546 2590361 ~ 2590615 (+)
G169946 NA non-coding upstream 77926 2588940 ~ 2589235 (+)
G169927 NA non-coding upstream 79132 2548634 ~ 2588029 (+)
G169921 NA non-coding upstream 156467 2509779 ~ 2510694 (+)
G169983 NA non-coding downstream 42924 2710298 ~ 2718282 (+)
G170024 NA non-coding downstream 107821 2775195 ~ 2775530 (+)
G169984 NA non-coding downstream 117361 2784735 ~ 2793651 (+)
G170043 NA non-coding downstream 148199 2815573 ~ 2815799 (+)
G169806 NA other upstream 329471 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 935984 1729413 ~ 1731179 (+)
G169340 NA other upstream 1356283 1250219 ~ 1310878 (+)
G169394 NA other upstream 1473601 1150297 ~ 1193560 (+)
G169357 NA other upstream 1548142 1053543 ~ 1119019 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other downstream 766762 3432846 ~ 3438839 (+)
CI01000034_04125435_04125780 RPRML other downstream 1457726 4125100 ~ 4126825 (+)
CI01000034_04192675_04200041 NA other downstream 1527264 4192311 ~ 4200636 (+)

Expression


Co-expression Network