XLOC_009135 (CR388163.1)


Basic Information

Item Value
gene id XLOC_009135
gene name CR388163.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 18177941 ~ 18180824 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017983
GTGGACACAACTTCTGTAAGAGCTGCCTGAACCAGTGCTGGAACAACAGTCAGACCTACAACTGTCCATTCTGTAAAGAAACATTCAATAAAAAGCCAGAGCTCAAGATCAACACAACACTCAGACAGCTTGTGCAAGTCTTCAAGCAAAACGTTCCTGAGAAAACATCTGAAGTTCTCTGTGACATTTGTGATGGTGTTAAGAAGAAAGCCCTGAAGATCTGTCTGCTGTGTCAAAATGCTTACTGTCAAACTCACCTGGATCTTCATCAGAAAGttacaaatttaaaacacaaattaattgatCCTGTGTTGAATCTTGAGAactatatatgtcagaaacatgaGAAACCTCTGGAGCTGTTCTGTAAAGATGATCAgacatgtgtgtgtttgctctgcGCTGTGACAAATCACAGGAATCACAACACTGTTGCTGTAGAAGAGGAGAGTGGTGTAAGAAGGTCTCAGATGATGGAGATGCATGCAGATATGAAGCAGATGATCCACGACAGAATGAAGAAAATTCAAGACATCAAACACTCAGCACTCTTGAAAAAAGAAACATCAGAGAAAGAGAAGGCTGAGAGCACTGAGCTCTTTGCTGATCTAATGAGCTGCATTGAGAGATGTCAGTCTGAGCTGCTGGAGATGATGGAGCAGAAGCAGAAAGCAGCAGAGAAGCAGGCTGAAGAGCTGATTAAAGATCTGGAGCAGGAGATCACTGAGCTGAAGAGGAGAGACGCTGAGCTGGAGCAGATCTCACACACTGAGGATCACCTGCACCTCCTACAGATTTAACCAGAGCTGAGCAAACCTCCACACACCAGCAGCTAGACTCAAATCAGTATCAGTGACACTCAGCTGAGTGTAGATACTCTGAGGAAAACTCTCCTTCAGCTACACGACACTTTGGATTACAAACTCAGCACAAGTGTGCTGAAAAAGATGCAGCAACATTTGGTGGATGTGACTCTGGATCCTGATACAGCTCATCCAGATCTTATCATCTCCGATAATGAAAAACAAGTGACAGATGGAGATATTGAGCTTGAACTCTTAGACAACCCTGGGAGATTTGACACTTGCCCATGTGTCCTGGCAAAAGAGGGGTTCAACTCAgggatattttattttgaagtgcaGGTAAAAGAAAAGACTGATTGGAATTTAGGAGTGGTCAGAGAATCCATTAAGCGGAAGGGAGATATTACAGCTGCACCTGAGGAAGGATACTGGATTATAGTTTTGGGGAATGGGAATCAGTATCTTGCAATTGATTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096928

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017983 True 1282 processed_transcript 0.43 6 18177941 18180824

Neighbor

gene id symbol gene type direction distance location
XLOC_009134 tmprss5 coding downstream 817 18164054 ~ 18177124 (-)
XLOC_009133 pih1d2 coding downstream 15294 18157665 ~ 18162647 (-)
XLOC_009132 CR388163.2 coding downstream 26161 18151665 ~ 18151780 (-)
XLOC_009131 CR385077.1 coding downstream 39334 18137741 ~ 18138607 (-)
XLOC_009130 cryaba coding downstream 53263 18119618 ~ 18124678 (-)
XLOC_009136 btr04 coding upstream 8821 18189645 ~ 18200358 (-)
XLOC_009137 btr16 coding upstream 18054 18198878 ~ 18209723 (-)
XLOC_009138 btr21 coding upstream 31366 18212190 ~ 18218227 (-)
XLOC_009139 or131-1 coding upstream 41035 18221859 ~ 18223769 (-)
XLOC_009140 wu:fj20b03 coding upstream 49670 18230494 ~ 18232712 (-)
XLOC_009127 BX901923.1 non-coding downstream 307851 17844191 ~ 17870090 (-)
XLOC_009125 NA non-coding downstream 423015 17751150 ~ 17754926 (-)
XLOC_009122 CR848791.2 non-coding downstream 795359 17379512 ~ 17382582 (-)
XLOC_009121 NA non-coding downstream 892798 17279553 ~ 17285143 (-)
XLOC_009145 AL845312.1 non-coding upstream 913687 19094511 ~ 19095107 (-)
XLOC_009147 NA non-coding upstream 1104340 19285164 ~ 19286600 (-)
XLOC_009150 BX324206.1 non-coding upstream 1176446 19357270 ~ 19357389 (-)
XLOC_009151 BX324151.1 non-coding upstream 1361996 19542820 ~ 19542934 (-)
XLOC_009152 CU013548.1 non-coding upstream 1401083 19581907 ~ 19583015 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location