XLOC_009137 (btr16)


Basic Information

Item Value
gene id XLOC_009137
gene name btr16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 18198878 ~ 18209723 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017986
CTGACATTCACTGCAGAGCTAAAGAGGAACAACTATGGCAGAATATTCAGACTCATCACAAAAACAAACTCTATCAGAGGAGCTCCAGTGTTCAATCTGTCTGGATGCGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACCAGTGCTGGAACAACAGCCAGACCTACAACTGTCCATTATGTAAAGAAACATTCAATAAAAAGCCAGAGCTCAAGATCAACACAGCACTCAGACAGCTTGTGCAGAAAACATCCGAGAAAGATAAAGCCGACTGCATTGAGCTCTTTGCTGATCTGATGCGCTGCATTGAGAGATGTCAGTCTGAGCTGCTAAAGATGATGGAGCAGAAGCAGAAAGCAGCCGAGAAGCAGGCTGAAGAGCTGATTAATGATCTGGAGCAGGAGATCACTGAGCTGAAGAGGAGAGACGCTGAGCTGGAGCAGATCTTACACACTGAGGATCACCTGCACCTCCTACAGATTTACCCAGAGCTGAGCAAACCTCCACACATCCGCAGCTGGACTCATGTCAGTATCAGTGACACTCAGCTGAGTGTGGAGACTCTGAGGAAAACGCTCACTCAGCTGCATGACAAACAGGAATtgagactcaccaaaactgTTCTGAAGAGGATGCAGCAAAATACAGTGGACGTGACTCTGGATCCTGATACAGCTTATTCAAAACTCATCCTGTCTGATGATAGAAAACAAGTGACTTACGGAGCCACTGTGCAGAAACTCCCAGCCAACCCAAAGAGGTTTGACAGTTGTTGCTCCGTCCTGGCAAAAGAGGGATTCAACTCTGGGAAATTTTATTTTGAGGTGCAGGTGAAAGGAAAGACTGACTGGGATTTAGGAGTAGCCAGAGAATCAGTTAACAGGAAGGGAACGATCACAGGGAGTCCTGTGAATGGATACTGGATTATAGTTCTGAGGAATGGAAGCCAGTACAAGGCTCGTGAGTCTCCAACTGTTTCTCTGTCTCTGAAAGTGAAGCCTCAGGTTGTGGGTGTGTTTGTGGATTATGAGGAGGGTTTGGTGTCTTTTTATGATGTGGAGTCCAGCTCcctaatttattcattcacagGTCAGACTTTTAGTGAGAAAGTCTTTCCATACTTCAGCCCTGGTACTACAAATGAGGGTAAAAATGCTGCACCACTGATcatcttaaatgtaaaaaataatatgtgaaTTTACTACATAAATATTAATCTTTTAACACTACGAGTTCTTGTTAAAATATGCAAGTCCAGCAGAATATTCAGCAAGAGCTACTGCCACAGATTCATGCTACATATTGTTTTCCTGAGAAAATAAAAATGGTGGAACATATATTACTTGACAGATATGATTATTTGTAGTGCAACCATGTAATCTGAAAGTATTTATACACTTGTGAGCtgattttaatgattaaattgaTGATACACTGATTTCACAAGTCTAAATCAACTTGAGCAAGGAGCAGGAGATCCCCACAGCTTCAGTGCCTGTATTTTGCCTGAATTCGGGAAAAAATTAGTTACTGCTGAAAATTAAGATTTATTATTGCAAATGAAAAGTCTATTTAGTTTTGACTGTCTATTTGTGAACTTTTCCGCTGTTTAAACTCAGTATATGAAATGCTTGAAtgtggaaatatatatatatatatatatatatattacgacCTGAGTGGACCGTAGCACATGTAAAATGTGAGATTGCATGTTTCTCTTaaaattgtattacatttttttctgtttttgtcatttttcacCTTTGAATTAGGTTCTGTCttcgttctaaatgattttgaaatattgagcttCAGAGTTTTTGCATTCCTTAGCAGAATTCCATAGCATAGtgtgtagcatttgttttttaaataaaaagtcttaaaatggccaaacttatagaaaaaaaacatcccataatgtaaataagataaaacaattaaaaaaaatatgtcaataactcaa
>TCONS_00017987
GCTACAGGTATGCTTAAACATGATTTTTCAGTCAAACTGAAACTGAATCAGCTGACATTCACTGCAGAGCTAAAGAGGAACAACTATGGCAGAATATTCAGACTCATCACAAAAACAAACTCTATCAGAGGAGCTCCAGTGTTCAATCTGTCTGGATGCGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACCAGTGCTGGAACAACAGCCAGACCTACAACTGTCCATTATGTAAAGAAACATTCAATAAAAAGCCAGAGCTCAAGATCAACACAGCACTCAGACAGCTTGTGCAGGTGTTTAGGCAAAACTTTTCTGAGAAAACATCCGAAGTTCTCTGTGATATTTGTGATGGTGTAAAGAAAAAAGCCCTGAAGATCTGTCTGCTGTGTCAAAACGCTTACTGTCAAACTCACCTTGATCTtcatcaaaaagttacaaatttaaaacacaaattaattgatCCTGTGTTGAATCTTGAGAactatatatgtcagaaacatgaGAAACCTCTGGAGCTGTTCTGTAAAGATGATCAgacatgtgtgtgtttgctctgcGCTGTGACAAATCACAGGAATCACAACACTGTTGCTGTAGAAGAGGAGAGTAAAGAGAGGAAGCCTCTGATTATGAAGATGAGGACAGATATGCAGCAGATGATCCAGTACAGAAAGAAGACAATTCAAGATATCAAATGTTCAATGGATCATAAAAAAAAAACATCCGAGAAAGATAAAGCCGACTGCATTGAGCTCTTTGCTGATCTGATGCGCTGCATTGAGAGATGTCAGTCTGAGCTGCTAAAGATGATGGAGCAGAAGCAGAAAGCAGCCGAGAAGCAGGCTGAAGAGCTGATTAATGATCTGGAGCAGGAGATCACTGAGCTGAAGAGGAGAGACGCTGAGCTGGAGCAGATCTTACACACTGAGGATCACCTGCACCTCCTACAGATTTACCCAGAGCTGAGCAAACCTCCACACATCCGCAGCTGGACTCATGTCAGTATCAGTGACACTCAGCTGAGTGTGGAGACTCTGAGGAAAACGCTCACTCAGCTGCATGACAAACAGGAATtgagactcaccaaaactgTTCTGAAGAGGATGCAGCAAAATACAGTGGACGTGACTCTGGATCCTGATACAGCTTATTCAAAACTCATCCTGTCTGATGATAGAAAACAAGTGACTTACGGAGCCACTGTGCAGAAACTCCCAGCCAACCCAAAGAGGTTTGACAGTTGTTGCTCCGTCCTGGCAAAAGAGGGATTCAACTCTGGGAAATTTTATTTTGAGGTGCAGGTGAAAGGAAAGACTGACTGGGATTTAGGAGTAGCCAGAGAATCAGTTAACAGGAAGGGAACGATCACAGGGAGTCCTGTGAATGGATACTGGATTATAGTTCTGAGGAATGGAAGCCAGTACAAGGCTCGTGAGTCTCCAACTGTTTCTCTGTCTCTGAAAGTGAAGCCTCAGGTTGTGG

Function

symbol description
btr16 Predicted to enable zinc ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-1066 Predicted to enable zinc ion binding activity.

Ensembl:

ensembl_id ENSDARG00000028850

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017986 False 1995 mRNA 0.39 7 18198878 18209672
TCONS_00017987 True 1511 mRNA 0.44 8 18199836 18209723

Neighbor

gene id symbol gene type direction distance location
XLOC_009135 CR388163.1 coding downstream 18054 18177941 ~ 18180824 (-)
XLOC_009134 tmprss5 coding downstream 21754 18164054 ~ 18177124 (-)
XLOC_009133 pih1d2 coding downstream 36231 18157665 ~ 18162647 (-)
XLOC_009132 CR388163.2 coding downstream 47098 18151665 ~ 18151780 (-)
XLOC_009131 CR385077.1 coding downstream 60271 18137741 ~ 18138607 (-)
XLOC_009138 btr21 coding upstream 2467 18212190 ~ 18218227 (-)
XLOC_009139 or131-1 coding upstream 12136 18221859 ~ 18223769 (-)
XLOC_009140 wu:fj20b03 coding upstream 20771 18230494 ~ 18232712 (-)
XLOC_009141 or131-2 coding upstream 28696 18238419 ~ 18240199 (-)
XLOC_009142 zbtb16b coding upstream 43819 18253542 ~ 18361475 (-)
XLOC_009127 BX901923.1 non-coding downstream 328788 17844191 ~ 17870090 (-)
XLOC_009125 NA non-coding downstream 443952 17751150 ~ 17754926 (-)
XLOC_009122 CR848791.2 non-coding downstream 816296 17379512 ~ 17382582 (-)
XLOC_009145 AL845312.1 non-coding upstream 884788 19094511 ~ 19095107 (-)
XLOC_009147 NA non-coding upstream 1075441 19285164 ~ 19286600 (-)
XLOC_009150 BX324206.1 non-coding upstream 1147547 19357270 ~ 19357389 (-)
XLOC_009151 BX324151.1 non-coding upstream 1333097 19542820 ~ 19542934 (-)
XLOC_009152 CU013548.1 non-coding upstream 1372184 19581907 ~ 19583015 (-)

Expression


Co-expression Network