XLOC_009139 (or131-1)


Basic Information

Item Value
gene id XLOC_009139
gene name or131-1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 18221859 ~ 18223769 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017990
ACATCCCAGCATCCACCTTCAGATTCCTGAGGCAAGCTTATTTTTGCTGTCATTATGAACTCCACATCGAACAGCAGTCTGAGCAACACTTTTATTATGAAATCACTAAAAGAGAAGGCTTTGCTGGTGCAGGTGCTGGTTGGGATTCTTCTGTATGTTAATGGACTGATGATTTTCACCTTTCTGAAAAAGGAGACCTTCAGGGACACACGCTACATTCTGTTTGCTCAGACTCTTTTTGTTGATTCTTCTTTTATGATATTTGCTGATTTAACCCTTCTATGCTCTGCTTACCAACTGATCATTCACAACATTTCTTGCTATGTGTTCTGTACAGTCATGTCTGTGCTCAGTATTTGTTCTCCGGTGACTCTTGTAGCCATGTGTTTGGAGCGCTATGTGGCCATATGTTTGCCTTTAAGACATGCCAGCATCTCCAGCCCCAAAAACATCATCAATGGGCTTCTCATCGTATGGGGTGTCAGTAGTGTCATCCCACTGTTTGTTTTCATTGGCTCTTTTGCTTATACTCCTCCTAATGCCATGAACTCATATGTTGTGTGTAGTATTGAGGTCATGTTACAAGTGAAATGGCTGGCAGACACGAGAGCGACAAGTCAACAGCTCTTATTCGTCATAATGTTGTGTATTGTTGGCTCTACTTACATCAAGATTATGATCGCAGCCAGATCAGCCTCAGCCACGAACAAGAAGTCAACATATAAGGGTCTCAGAACTGTTATTCTCCATGGCATTCAGCTGATTCTGGGTATGATGCAGTTTATAACACCATACACTGAAATGTCTTTATGGAAAATAGATGTcatgctgtttttaaatgtaagataTTCAAATTTCATCTTGTTTTGGATTTTGCCTCGTAGCCTGAGTCCATTAGTATATGGACTACGAGACAAAAAGTTTTATTATGCTCTTAAATATTATGCCTTTTGTGGGGTTTTTGTGGTTAGTAAGCATAAAGTACGAGATATTAAAATCTCCCGAAGGAAAAGATGTTAAGCACATCACAAatttaagtactgtaaaataatCAGCAATAATGTCTGTCATTGAATTAAATAATACACAATGGAAATGTATATACAGGCCTATATAAGTATGGAAATAATAAGGCTGCTTAAAAATACAGGGAAAACATCACGGAATCCACTTGTCTGATTTACTTATATTTGagtgaaatgtaattttagtgTTATTCTCTACCCACTGATGACATTTGTTTCTAACTTAAAATACAAATGTCAGGTAGagcaatttttttgcttaaaataacataTATATGAACTGTGTAAAATCCTCTTGTACATCTTTACAACACAAAGCCAGTTTATCTTTAACTTAAACTGCaatattaattcaaatataaGCTTTCCGGAAATATGAGTAATCTAGTTTACAAGTGTTCTACCATGGCTTTATAATGTGAACATATTAGACCTTAGGCTGTAAGAGgtgaatgttggtcaagctcctgcactttttacaaataatctgcAAGCAGACAAACAGTAAACAAATCTCAAATTGTGTCAACCCTGTCATGGACAAATTCAGTAGGATAAGTATATTTTCATTgcagtgtgattataaaatgtacatttttagaaaaataGTGTGTTCCTTTACCAACACAACTTTATATATTATTGAAAAAGTCtcttagtaataaaaaaataatggacAAAAAGGTTTCAAATACTCAACTTCTGTTTTCACCAACTACTGcaaaaccactgagccaccatgccatctCTTCTGTTATCAATTAAGTTTTatcaatatgcaaattaatgggaaaataaacaattattgtctttcaaattaaactaaattcgCACATTAATGTAAATCTTTACATTGTGCATTGTATTGGAATTGTGAAGGGAATGT

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-45 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000005865

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017990 True 1911 mRNA 0.35 1 18221859 18223769

Neighbor

gene id symbol gene type direction distance location
XLOC_009138 btr21 coding downstream 3632 18212190 ~ 18218227 (-)
XLOC_009137 btr16 coding downstream 12136 18198878 ~ 18209723 (-)
XLOC_009136 btr04 coding downstream 21501 18189645 ~ 18200358 (-)
XLOC_009135 CR388163.1 coding downstream 41035 18177941 ~ 18180824 (-)
XLOC_009134 tmprss5 coding downstream 44735 18164054 ~ 18177124 (-)
XLOC_009140 wu:fj20b03 coding upstream 6725 18230494 ~ 18232712 (-)
XLOC_009141 or131-2 coding upstream 14650 18238419 ~ 18240199 (-)
XLOC_009142 zbtb16b coding upstream 29773 18253542 ~ 18361475 (-)
XLOC_009143 ncam1b coding upstream 145040 18368809 ~ 18574716 (-)
XLOC_009144 arhgap32a coding upstream 812608 19036377 ~ 19128705 (-)
XLOC_009132 CR388163.2 non-coding downstream 70079 18151665 ~ 18151780 (-)
XLOC_009127 BX901923.1 non-coding downstream 351769 17844191 ~ 17870090 (-)
XLOC_009125 NA non-coding downstream 466933 17751150 ~ 17754926 (-)
XLOC_009122 CR848791.2 non-coding downstream 839277 17379512 ~ 17382582 (-)
XLOC_009145 AL845312.1 non-coding upstream 870742 19094511 ~ 19095107 (-)
XLOC_009147 NA non-coding upstream 1061395 19285164 ~ 19286600 (-)
XLOC_009150 BX324206.1 non-coding upstream 1133501 19357270 ~ 19357389 (-)
XLOC_009151 BX324151.1 non-coding upstream 1319051 19542820 ~ 19542934 (-)
XLOC_009152 CU013548.1 non-coding upstream 1358138 19581907 ~ 19583015 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01087378_00000372_00001352 NA coding CI01087378 null 277 ~ 1378 (+)