XLOC_009144 (arhgap32a)


Basic Information

Item Value
gene id XLOC_009144
gene name arhgap32a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19036377 ~ 19128705 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017998
ATAGCCACGCccccaaacacacacgcacgcactcagTTTATCAGGTGATGCGTAAAGGAAAGAAAGAAGTTTTCATGTGTCAAGAAGCactttcatttactcactcactcacaccaCGTTCACACACGATAAAGGATGCCTTTGTTAGATGCCTGTGCACACTCATTCAAAGTAAAGGGATTACCTGTGTAATAGAGGGAAATATCTCTCGGATGTCGTTTGGTCTGCAGTGACGCTGAAACAATCAATCAGACGGGCAGCTGTAGCAGTGACTCAGTATCATGGAGGCGAGCAGCAGGACTGCAGCAGCGACAAACGCCAGAGCTTCAACACCTCCGACAGACGCAAGCACTCATGATCCCAGTGAAGGGCCCCACCCAGAGGAGGATGAGGGGGAGGAAGACAGGAGCTTGCAGCCAGCAGAGACTGCAGGCTGGGAGGACGCCATTGCTGTTATGGCACGAGGTGCGCCAACGGTCCCTGAACTGCCTGCCGAGTCTTCTCTACGCTCATGTGTCAGTACGGCCAGCATGAAGGTCAAGAACGTCAAAAAACTGTCCCTCACCAAACGCCATTTTCCCAAGCTGGCAGAATGTGCCCACTTTCATTATGAGAATGTTGACTTTGGCTCCGTGCAGCTGTCTTTAACTGATGAACAGAATGACCTCACAAACAATGGCCTGGACTCAAAAGAGTCGGTGTATCTGATCCAGATCTGTTGCCAGGGTCGTAAGTGGACAGTGAGGCGTTCTTATGAAGAGTTTCGTGTCCTTGACAAGCACCTGCACCTCTGTATTTATGATAGAAGATTCTCTCAGCTCCCTGAACTGCCCCGAATAGACAGCCTGAAGGACAAAACTGGGACACTTTCCCAAATGCTTACTGCGTATATTTCCCGTTTGTCAGCCATCGCTGATAATAAGATCAACTGTGGACCAGCACTCACATGGATGGAGATTGATAACAAAGGAAACCACCTGCTGGTTAATGATGAATCCTCTATTAATGTTCCTGCTGTTGCTGCGGCTCACGTAATAAAACGCTACATTGCTCAAGCAGCAGATGAACTCTCTTTTGagGTTGGAGATATAGTGTCAGTGATTGATATGCCTCCTAAAGAAGACACCGGCTGGTGGAGGGGCAAACATGGTTTTCAAGTGGGATTTTTTCCGTCTGAATGTGTGGAATTAATTAGTGAGAAAATCCCCTCCAACGTGACCAGCTCATTGGCCAAACCAGTGTCTAAGAAGCATGGCAAGCTGATCACTTTTCTGCGCACGTTCATGAAGTCCCGTCCCACCAAGCAGAAGCTAAAACAGAGAGGGATCCTGAAGGAAAGAGTTTTCGGCTGTGACCTTGGAGAACATTTGCTGAACTCAGGCCATGATGTTCCTCAGGTCATCAGAAGCTGCACTGAGTTCATTGAGAGACATGGAGTTGTGGATGGGATTTACCGCTTGTCTGGAATCTCCTCTAACATTCAGAAACTGAGGCATGAGTTTGACTCGGAACATGTCCCAGATCTCACTAAAGACACTTACGTCCAGGACATCCATTCAGTGGGATCTCTGTGCAAACTTTACTTCCGGGAGCTTCCCAACCCTCTGCTGACCTACCAGCTTTATGAGAAATTTTCAGATGCTGTATCTGCAGCCACTGATGACGAGAGGCTGGTCAAAGTCCATGACGTGATTCAGCAGCTGCCGCCGCCTCACTACAGgACTCTCGAGTTTCTCATGAGACATTTATCTCGAATGGGAACGTACAGCAATGTGACCAATATGCACTGCAAAAACCTTGCCATTGTTTGGGCTCCAAATCTTCTCAGGTCTAAACAGATCGAGTCAGCATGTTTCAGTGGTACCTCTGCTTTCATGGAAGTGCGGGTTCAGTCAGTGGTTGTGGAGTTCATCCTTAATCACGTCGATGTTCTGTTCAGTCCCAAACTCAGCACTCTGATCCGCCACAGCACAGGCCACACTACTTTAGCTCGACCTAAGTCTCTACTAGTGAGTTCTCCATCTACCAAACTGCTTTCTCTGGAAGAAGCCCAGGCTCGAACTCAAGCCCAGCTGAACTCTCCTGTGTCACCTGATAGCAAGTATATCGATGTGGGAGAAGGGCCTGCCGCCCTGCAGGGCAAGTTCCACACGGTCATAGACTTCCCATCTGAAAGGAAGAAGGGCTCAACCAAAGGAAAGAAATCTCCTGTGGGAAACTGGCTTTCCTTCTTTAATATGGGAAAGTCGTCAGCTTCAGCCAAGCCCAAACTGCACCGTCATCCCAGCGAGCCCAATGACATGAAAACCACTCCTCTTCCAGGTGGAAGAGGAGACACTGGGACTCTACGTTCTGCTAAAAGTGAAGAATCTCTGTCCTCTTCACATAACTTTGAGGGTGGATCAAATATTTACCGTCCACGTCGGCCGCTTTCCACCAGTGATGCTTTATCACTCTCCTTCAATGAGGAGCTTCTAGACAGCAGACTGACTGGAGACTCTCGGTCCAGTCTCAAAGACCATAGGAAAgacacttcttcttcttcttgtgtgCCAGCTCTTATATCTCCACCCCATCCTTCAGCAGACGCTGAGTTTATAGGTATATCCTCCTTAGACATAGACCCATTGGCATTTCAGTCAGCACGGTTGGTTGAGcaggaaaataagaaaaaaggcaGTCGCAAGAAGGCAGGAGGCAAAAACCATGAGTTAGAGCCTTCCAACAAAGTCACAAGTCCTTCACAACCTCCTGATCTCATTCCACTGCGTGCAGAAGATTCAAAACACAGACCCTCTGAACTGCCACTCTCCTCAACTAATCTAGATGTAGGCTTCTCTAAGACCGGCCAAATGGGCACCTCAAGGAGTTCAGTACCAAAAAGCAGTACTGTGTCCTGTCCTTCTGACATTGTGTCCCTCATGAAAAAGCCCAGCGTGTCTATGAAAGCTGGAGAAGGCCATCAGCGATCTGCGAGCTTCTGCAAAACTGAAAGTAAATCTGCAGATGTAAAGCAGCACAGAAGAGCAGACTCAGGTGCAGTGACATTTGAATGCACGCCTGGTTTGGTGAGGTCTGTATCTCTCATAACTCCCCAGCCTGCAGTAAAAAGTGCTGCCCGTATGTTAGCTCTAGCGCTAGCCGAATCCGCCCAGCAGGCAACTCGACTCAGCAAACGTGGGAGCTCTGAACCTCCCACACCTATTTCTCCAATTCATCATAAAAACCCACTCTTCACACTCCAATTTCCTCCTCCCGTACAAACGTCTTCTGATAGAGAGGAGCGGTATGCGTCTAACAGGGCTTTCCCGGATCCATCAAGCACTATGTCTACTGAGAGTCACACTGATGCCGGCAGCCTACGCAGCACCTGCGCCTGTCATGGCAGTGAGAGCGGACTCAGCTTCTCTGATGGTTGTGATGCACCAGCTGGTGGCCAGTGCACCCATGTGCCCTCTCAGGGTTTCTCTCCTCGCACAGATCCAGAGATTCAGCTGGTTCAAGAAACCCAAACAACTCTGAGAGATAATATCCGTCATGTTGGAGTTGGTACAGATGGAGGTGGATCAAGCCTTGATGCTGAGATGGAGGTACGTGGAAGTTTACAGACGACACTCTCTGAAAGATACTCTTCCTTGGATAGTCCTTCAGCCATTGATGCACTCCACAACAAGCAGGCTGCTAATGCTGCTAACTTCCGAGCCATATTGGCGGAAACAGCCATGCCTGCTTCAGTACAAGAAGTTCTTCCACAAGCATCAAGTACTCCACCGAGTGTGTTGTATCAGTACAAACCCAGAGAGCAAAGGTCTGCTTACTCCCAACACTCCCAACAATGGTCAAGTTCGGATGGGCAAAGCACATCTTATTATCAGGTTGACGATGGGCGTCCACATCCTAGAGTTCTCTCAAGAAGCTACTGCAATACCCTTGCTCCACGATCCCTACATCAGTCTATTAAGTATAAAGGTCAACGGGAAGACTACTCCTCAGTTGGTGTCTATAGACATGGAGGACCAAGGTATCCACCGTTGGATGGAGCCTCCGTCTACCCAACTATCCGCAGGGTGCGCTCTATGCACACTCCACCTGAGGACAAATTTTTCTTCCTTCAACGGCAAGGAAGCCAAAGCAAACCTTACCAAAATCCACCACCATCAGACATCCAGCATGTGCGGCCTTACTTTGAAGATGGGAAAGTTCGGTATAGGTACAGCCCCTATTCAGAGGCTCGCTACAATCAATACCGAGAGAACAGTGGGTACACTCTGTCTTACACACTCAACAAACTGCCTTCTCGCTCATCAAAGGTGATGGCCACTTCCGAAAACTACCACAAGCCTCTACGCAACCTCCCTTTGAACAATGAGTCTGACTTCATGACCAGAGATGCTGGTTTTCTGCCAAGAAAGAAGAACCCTTCTTTCTATGAGGCTTTTAATTCTGGTTTATCTGATCGACATTTCAGTCAGTCCATTAGGCAGGAAAATGCAGCCAAGGAAAGGCCGTTGGGTCCGGTTGTGGCCCAGCCCCATCTTGTAAGATGCGATCGTCAATGCCAAGAAACAATGCACACCAGGAGCAGGTCAAACTCTGGGAAGGAGATGCTGATTTCAACTGAAGGGGCTGATGGGAAATACAGGGTCACGATGGTATCCCATTACTCCCCAGAGCACCCACTTTCTGAGCCTGATATGCCTGTGCCCTCAAAGTCAGACAGGCATGACAGCGGGCAGGGAGCCAAATCGGCTCTTATAATGAAGCAGAGTCGGTCCATGCACAACTATCCTCAACACAGGCTTGAGTCCACAGCACTGCCACACAATCTGACCCTGCATAAGGAATACAGCTGCCCTGACTTCAAACACACCGGGTCCAGCGATAGCTTCGGTGTCACACACCGCAACCAGGACAGGCTTATATATAAGACTCTCAGCAATCCTAAAGAGGACTACCAGTACATTCAGGCAATGAGCAGAGAACCGCAGAGGTCTAAGAGATCGCAGAGTGTAAAAAATCGCAATCCACCTGGTCAAGCCAAAATGACTCTGGAGCGGGATCACAGACTGCCTTTCTCCTCCCATAGCAGGACAAGAACTCGTAGTATGTATGTGCCATCTCGCTCAGACTATTCTGAAAGCTATGTTTCAGCACATCCGAAAGTTCCTAAGAGTAGCCGAGCAAGTTCTGGTGTTTTCCCAAACTACGGCTGCATGCCGCTTTATAGTAACAGACTGTATTCCACAGCTGTGGGCCACGCAGGATTTCACCAGACAGAGCTCAGGCCTGAGATGCAAATTTATGCTGATTAAGagatttctatatttaaaaataaataaataaataaataaataccaaaataaatcaataaataagaaatatatgACCTCTGCAGGGCAGTGGTTTTCTATTGTTAATccgataaaaaaataatatttaaaagatttaaaatgttttaattgttcACTAAATGGTGTCTTTCACTGCATACATACAGTTTCAAATGACTTAAGCTAACACTGCGTATTTAGGATATCACTTAAATTATGGTAATGGGTTACCGTGGCTTTATTGCTACTTTGATTTATTAAAGTGTGTTgtgtaaaatttgtcattttgttACTGTAATAGAGGTCACAGGTTTCAAAGTGAATACAAATATGATCTTTAATAAAAGAGAAAATGGTTTATACAGTAGGAGCCACTGCCTTGTGTTTCTGGGTGAGTgtagtttttttatgtatggCCATGACTGTGGAATAAAACAGTTATATATGTCAAAGACATCAGCATATACTCTATGGTCTGACTTAAACTATGAAAGGTCATAGTCTCAGCCACTTCCCCCAGACATTATCCCCTATGCATTTTATAATCATGCACTTTATAGTTGGTCTGTGTTTTATGTAACAACAGGCACTTTAGACAtgaccacattttttttatttctttgtgttCGATTTAAAGATGTGGGGGAGCACTCATCTAAACCGTTAGTTCAATTAAGTGGTAATCATTACATGATTACATAAGGAATAAAGTGTTCATCAAAATGTACTGTTCTCTTTTTTCAGTTGATTTATAAGACAATTGTTATGTGTTCACGTTGCTTTACTCCTATTAAAGTTAGTTTGTTCAAAATCATGACATGTAATCTCGTACTTCTAATCATTGATCAGCCTGTCATGTTTTGTTTCTTGTGATAAAAGCCTTGCAAACAATTGttgaattattacatttttttaaaatgtacaaagaCTACAAGCTGTTGCACGTTTCATTGGGCTGCCTTGTTGTTATCCCAAACACCAGCTCCCTAAAGCATtttaacagttgaagtcagtaagCTATATTACTAACATATAGTCCTGTTATTGTTCCGTTTTAATGAATTTTTCAATACTCATTAATATTAATGACACCGGTTATTAAATTTTATAGTCCCTGCAGGTGTTGAGCAGTGAACAGCAGAGGGCACTGTAGTACTGGAGGACATGATGGTGCTTCCTCATTGAAGTTTCCTCCATATGCGCTAACACGAGGGCACATCAAAGCTTCTGAGGCAGTAGGTTTCTGAtgcaatacaattattatttctGCAAGACGACGTTTATTGTATATTATACCCGGCATTTTGGTTTTAAGGTTTTGAACTGTCAGGTTGTTGGCATGAATGAAGCTAAGGTGGTGACATGGGGGACAACGATGCGTAGCGGATGCTATATTAGATACTAATTGTTTTCACTTTGTGCGTCAGTCACAGTGAATTCAATTTGCACAGGAACTTGGTTGTCTAGCCGTTCGCATTTATTCCATATTCTGCTTCCACAAACAGCTGCTATTTCATAAAGAaagtgttaatttcaacactaaAAACTGTTGATTTTCAAATATCACTAAAAACAATGGTCTGCAGAGGAGTAAAATATTAAATCCTGAAAGAAGGCTTTTGTATGAGGAGCACGAGATCCGATCTTTACATTCAACGTACACTTCCATCCAGCAAGCAGCTAGCAATTTTTGATGCTTCTGAAGGCTGAAGCCAAAT
>TCONS_00017999
ATGAAGTCCCGTCCCACCAAGCAGAAGCTAAAACAGAGAGGGATCCTGAAGGAAAGAGTTTTCGGCTGTGACCTTGGAGAACATTTGCTGAACTCAGGCCATGATGTTCCTCAGGTCATCAGAAGCTGCACTGAGTTCATTGAGAGACATGGAGTTGTGGATGGGATTTACCGCTTGTCTGGAATCTCCTCTAACATTCAGAAACTGAGGTCtggaatttaa

Function

symbol description
arhgap32a Predicted to enable GTPase activator activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be active in several cellular components, including Golgi apparatus; actin cytoskeleton; and nuclear lumen. Orthologous to human ARHGAP32 (Rho GTPase activating protein 32).

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0007165 signal transduction biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0005938 cell cortex cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0001650 fibrillar center cellular_component
GO:0005096 GTPase activator activity molecular_function
GO:0035091 phosphatidylinositol binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-918 Predicted to enable GTPase activator activity. Predicted to be involved in small GTPase mediated signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be active in several cellular components, including Golgi apparatus; actin cytoskeleton; and nuclear lumen. Orthologous to human ARHGAP32 (Rho GTPase activating protein 32).

Ensembl:

ensembl_id ENSDARG00000075334

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017998 False 7048 mRNA 0.45 22 19036377 19128705
TCONS_00017999 True 222 mRNA 0.46 2 19050834 19051152

Neighbor

gene id symbol gene type direction distance location
XLOC_009143 ncam1b coding downstream 461661 18368809 ~ 18574716 (-)
XLOC_009142 zbtb16b coding downstream 674902 18253542 ~ 18361475 (-)
XLOC_009141 or131-2 coding downstream 796178 18238419 ~ 18240199 (-)
XLOC_009140 wu:fj20b03 coding downstream 803665 18230494 ~ 18232712 (-)
XLOC_009139 or131-1 coding downstream 812608 18221859 ~ 18223769 (-)
XLOC_009146 igsf9ba coding upstream 2997 19131702 ~ 19250543 (-)
XLOC_009147 NA coding upstream 156459 19285164 ~ 19286600 (-)
XLOC_009148 thyn1 coding upstream 202454 19331159 ~ 19334448 (-)
XLOC_009149 esamb coding upstream 224988 19353693 ~ 19443997 (-)
XLOC_009150 BX324206.1 coding upstream 228565 19357270 ~ 19357389 (-)
XLOC_009135 CR388163.1 non-coding downstream 855553 18177941 ~ 18180824 (-)
XLOC_009132 CR388163.2 non-coding downstream 884597 18151665 ~ 18151780 (-)
XLOC_009127 BX901923.1 non-coding downstream 1166287 17844191 ~ 17870090 (-)
XLOC_009125 NA non-coding downstream 1281451 17751150 ~ 17754926 (-)
XLOC_009122 CR848791.2 non-coding downstream 1653795 17379512 ~ 17382582 (-)
XLOC_009151 BX324151.1 non-coding upstream 414115 19542820 ~ 19542934 (-)
XLOC_009152 CU013548.1 non-coding upstream 453202 19581907 ~ 19583015 (-)
XLOC_009157 NA non-coding upstream 655786 19784491 ~ 19793611 (-)

Expression


Co-expression Network